| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,173,614 | G→A | 5.2% | A138V (GCG→GTG) | PP_1926 ← | phosphotyrosine‑protein phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,173,614 | 0 | G | A | 5.2% | 234.2 / 2.2 | 76 | A138V (GCG→GTG) | PP_1926 | phosphotyrosine‑protein phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (43/29); new base A (2/2); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01 | |||||||||||
GATGACATCGAGTAGTTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGCCTC > NC_002947/2173471‑2173762 | gATGACATCGAGTAGTTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTcg > 3:289659/1‑149 (MQ=255) tGACATCGAGTAGTTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTcgcg > 8:216344/1‑149 (MQ=255) cATCGAGTAGTTCGCCTTCGGCCGTCCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTcgcggc > 7:56789/1‑149 (MQ=255) gtTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCAcc > 5:272246/1‑132 (MQ=255) gtTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCAcc < 6:272246/132‑1 (MQ=255) ttCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGATGGCGAAGCTCCTGCACCCAGTCGATCGCCTCGCGGCGC‑G‑GCATTCCg < 4:289659/149‑1 (MQ=255) ttCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCg < 7:37678/149‑1 (MQ=255) ttCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCg > 7:95789/1‑149 (MQ=255) tCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCACCTCGCGGCGC‑G‑GCATTCCg > 8:242423/1‑148 (MQ=255) cGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGa > 2:68308/1‑149 (MQ=255) ccTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGagt > 4:203211/1‑147 (MQ=255) ccTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGAtt < 8:150022/149‑1 (MQ=255) cTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTc > 7:330423/1‑149 (MQ=255) cTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCAAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTc > 1:69456/1‑149 (MQ=255) ggCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTTATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGTCTCGCGGCGC‑G‑GCATTCCGGATTCGATc < 1:16903/149‑1 (MQ=255) ggCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATc < 8:118233/149‑1 (MQ=255) ccg‑ccATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcag > 4:175045/1‑149 (MQ=255) g‑ccATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcagca < 4:246899/149‑1 (MQ=255) g‑ccATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcag > 3:246899/1‑147 (MQ=255) g‑ccATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcag > 1:350602/1‑147 (MQ=255) cATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGa > 4:339588/1‑149 (MQ=255) gTTTCTCCTGTCTGGCTGGAGCGCTGAGTCTTGGCCTAACTTGTTGTGGTAGTTGATGTGGGCTGGGTTGTGTTTCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGTTCGCCTCGCGGCGC‑T‑GCATTCCGGATTCGATCAGGAGACggt < 2:114235/149‑2 (MQ=255) tttCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGa > 6:55874/1‑136 (MQ=255) tttCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGa < 5:55874/136‑1 (MQ=255) tcCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGc > 4:374844/1‑148 (MQ=255) cTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGc < 3:209759/146‑1 (MQ=255) cTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGaa > 7:45644/1‑149 (MQ=255) cTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGaa > 5:174884/1‑149 (MQ=255) tGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAAc > 6:284223/1‑149 (MQ=255) tggctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGAtt > 7:348491/1‑122 (MQ=255) tggctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGAtt < 8:348491/122‑1 (MQ=255) tggctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcag < 8:194099/129‑1 (MQ=255) tggctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATcag > 7:194099/1‑129 (MQ=255) gctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCGAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCg < 2:69456/149‑1 (MQ=255) gctggAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCg < 8:196822/149‑1 (MQ=255) gAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGt < 2:350602/147‑1 (MQ=255) tCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCg > 8:319197/1‑148 (MQ=255) cGCCTAACTGGTTGATGTAGTTGATGTGCTCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGTCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCTGTGCGGCCGGAgccg < 7:299412/146‑1 (MQ=255) aCTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAg < 8:56789/149‑1 (MQ=255) aCTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCACCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGAGCGGCCGGAGCCGCCCTTGCAg < 7:242423/149‑1 (MQ=255) cTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGt < 7:319197/149‑1 (MQ=255) tGGTTGAAGTAGTTGATGTGCGCAGGCATCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCTATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTg > 1:129521/1‑149 (MQ=255) gTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTg < 8:95789/147‑1 (MQ=255) gTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGa > 7:173218/1‑149 (MQ=255) ttGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGAt < 8:156095/149‑1 (MQ=255) gATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTg > 5:2409/1‑149 (MQ=255) aTGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGa < 7:93307/128‑1 (MQ=255) aTGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGa > 8:93307/1‑128 (MQ=255) gATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCt > 3:365217/1‑149 (MQ=255) gATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCt > 2:314943/1‑149 (MQ=255) tgtgCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCtt < 6:2409/148‑1 (MQ=255) tgCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCttgtt < 6:174884/149‑1 (MQ=255) cgcAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCttgttg > 1:143217/1‑148 (MQ=255) aGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGaa < 6:265690/93‑1 (MQ=255) aGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGaa > 5:265690/1‑93 (MQ=255) cTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGa < 3:339588/149‑1 (MQ=255) ttCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAg > 1:146154/1‑149 (MQ=255) cTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGc > 8:39470/1‑148 (MQ=255) gAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGCTG‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCa > 1:97046/1‑148 (MQ=255) gAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCa > 7:212657/1‑147 (MQ=255) gAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCAGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCa > 6:116045/1‑147 (MQ=255) gCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTc > 4:7936/1‑149 (MQ=255) ccGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTcc > 8:73360/1‑148 (MQ=255) aGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACt > 5:205514/1‑149 (MQ=255) cGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑GAGCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCg > 1:70012/1‑139 (MQ=255) cGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCg < 2:70012/138‑1 (MQ=255) cTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGc > 5:308138/1‑124 (MQ=255) cTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGc < 6:308138/124‑1 (MQ=255) cTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAAtct > 5:127485/1‑149 (MQ=255) cTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAAt < 8:173218/147‑1 (MQ=255) cACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAAtctct < 8:330423/148‑1 (MQ=255) aCCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTcc > 3:73910/1‑149 (MQ=255) cccAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTcc > 6:46080/1‑148 (MQ=255) gATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAg > 4:247581/1‑149 (MQ=255) aTCGCCTCGCGGCGG‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGGCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGc < 7:216344/149‑1 (MQ=255) cGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGCCt > 6:124374/1‑149 (MQ=255) gCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGCCt < 7:39470/148‑1 (MQ=255) gCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGCCTc < 3:374844/149‑1 (MQ=255) | GATGACATCGAGTAGTTCGCCTTCGGCCG‑CCATGGTTTCTCCTGTCTGGCTGGAGCGCTCAGTCTTCGCCGAACTGGTTGATGTAGTTGATGTGCGCAGGCTTCTGAATCGCCCGAGGGCGAAGCTCCTGCACCCAGGCGATCGCCTCGCGGCGC‑G‑GCATTCCGGATTCGATCAGCAGACGGGCAGCGAACAGCCCGGTGCGGCCGGAGCCGCCCTTGCAGTGGATTGCCAGGGCCTTGTTGGAAGCGAGCAAAGCGTCCAACTGGTGGCGAATCTCTCCCAGCCGAGCCTC > NC_002947/2173471‑2173762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |