Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,303,578 G→C 6.3% L422V (CTG→GTG)  PP_2027 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,303,5780GC 6.3% 234.1 / 2.7 74L422V (CTG→GTG) PP_2027hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (30/39);  new base C (3/2);  total (33/41)
Fisher's exact test for biased strand distribution p-value = 6.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCTGTGCTC  >  NC_002947/2303432‑2303725
                                                                                                                                                  |                                                                                                                                                   
aTCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCa                                                                                                                                                   <  1:155757/149‑1 (MQ=255)
       gcCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACggtggt                                                                                                                                            >  6:223506/1‑149 (MQ=255)
         cTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCa                                                                                                                                          <  3:216730/149‑1 (MQ=255)
         cTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTAGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAAAGGGCGCGCCACCACAGGGCAAAGCCCAGCACggtggt                                                                                                                                            >  1:316452/1‑147 (MQ=255)
            gcgcGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAgg                                                                                                                                        <  1:367079/148‑1 (MQ=255)
            gcgcGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAg                                                                                                                                         <  1:239548/147‑1 (MQ=255)
              gcgTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCa                                                                                                                                     <  5:283322/149‑1 (MQ=255)
                gTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCTCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCACCACGGTGGTCAGGGCaaa                                                                                                                                   >  8:29615/1‑149 (MQ=255)
                gTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCaaa                                                                                                                                   >  5:308264/1‑149 (MQ=255)
                gTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCaaa                                                                                                                                   <  2:99604/149‑1 (MQ=255)
                     cTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCa                                                                                                                              <  1:251614/149‑1 (MQ=255)
                          ggTCGTTGGCCTGGCATGCGCGCTTGAGGTCGGCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGtgtg                                                                                                                         <  4:377248/149‑1 (MQ=255)
                           gTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGtgtg                                                                                                                         >  1:329586/1‑148 (MQ=255)
                            gcGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGa                                                                                                                       <  3:30569/148‑1 (MQ=255)
                              gTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCa                                                                                                                              >  4:209197/1‑140 (MQ=255)
                              gTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCa                                                                                                                              <  3:209197/140‑1 (MQ=255)
                              gTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGa                                                                                                                       >  3:90534/1‑147 (MQ=255)
                                    cTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGcc                                                                                                               >  5:374148/1‑149 (MQ=255)
                                       gCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAgg                                                                                                            <  5:223506/149‑1 (MQ=255)
                                         aTGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGc                                                                                                          >  8:12726/1‑149 (MQ=255)
                                           gcgcgcTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCca                                                                                                        >  3:239543/1‑149 (MQ=255)
                                           gcgcgcTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCca                                                                                                        >  3:234675/1‑149 (MQ=255)
                                             gcgcTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCca                                                                                                        >  6:239766/1‑147 (MQ=255)
                                             gcgcTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCca                                                                                                        >  8:17653/1‑147 (MQ=255)
                                                cTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCAcagca                                                                                                   <  7:355631/149‑1 (MQ=255)
                                                   gAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAgg                                                                                                 <  1:81404/148‑1 (MQ=255)
                                                        cgtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTg                                                                                           <  4:79276/149‑1 (MQ=255)
                                                         gtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTgg                                                                                          <  5:192506/149‑1 (MQ=255)
                                                         gtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCACCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTgg                                                                                          >  2:389408/1‑149 (MQ=255)
                                                         gtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCACCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTgg                                                                                          >  2:383457/1‑149 (MQ=255)
                                                             aGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgct                                                                                      >  1:134208/1‑149 (MQ=255)
                                                             aGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgct                                                                                      <  2:329586/149‑1 (MQ=255)
                                                              gCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgctg                                                                                     <  5:172194/149‑1 (MQ=255)
                                                                 aGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGctgctg                                                                                  <  7:12726/149‑1 (MQ=255)
                                                                       gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAggg                                                                                                <  7:302066/129‑1 (MQ=255)
                                                                       gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAggg                                                                                                >  8:302066/1‑129 (MQ=255)
                                                                       gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCtgttg                                                                               >  5:233073/1‑146 (MQ=255)
                                                                       gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCtgttg                                                                               <  6:233073/146‑1 (MQ=255)
                                                                          ggCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGcc                                                                          <  6:348557/148‑1 (MQ=255)
                                                                           gCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCAcagca                                                                                                   >  6:87805/1‑122 (MQ=255)
                                                                           gCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCAcagca                                                                                                   <  5:87805/122‑1 (MQ=255)
                                                                            cTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCAc                                                                       <  7:17653/149‑1 (MQ=255)
                                                                                gCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCggg                                                                   <  7:343761/149‑1 (MQ=255)
                                                                                gCCCGTGCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCggg                                                                   <  7:338721/149‑1 (MQ=255)
                                                                                   cGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGgtg                                                                >  7:266302/1‑149 (MQ=255)
                                                                                          cgcCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAgg                                                                                                                                        >  1:348163/1‑70 (MQ=255)
                                                                                          cgcCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAgg                                                                                                                                        <  2:348163/70‑1 (MQ=255)
                                                                                          cgcCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGgc                                                           <  5:252650/147‑1 (MQ=255)
                                                                                                    agcaCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgctgct                                                                                   <  3:227642/113‑1 (MQ=255)
                                                                                                    agcaCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgctgct                                                                                   >  4:227642/1‑113 (MQ=255)
                                                                                                    agcaCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCgg                                               >  2:34488/1‑149 (MQ=255)
                                                                                                     ggaCCGCTGGCCGCGAACGGGCGGGCCAACACAGGGCAAAGCCCAGGACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCggg                                              <  2:316452/147‑1 (MQ=255)
                                                                                                     gcaCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCGCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGTGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCggg                                              <  7:29615/149‑1 (MQ=255)
                                                                                                      caCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGt                                             >  7:158136/1‑149 (MQ=255)
                                                                                                       aCCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGtt                                            <  6:308264/149‑1 (MQ=255)
                                                                                                        ccGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTg                                           <  5:239766/149‑1 (MQ=255)
                                                                                                         cGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGt                                          >  7:348719/1‑149 (MQ=255)
                                                                                                           cgtcacgcgAACGGGCTCGCCACCACAGGCCAACGCCCAGCACTGTGGTCCGTTCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTcc                                        <  4:283443/144‑1 (MQ=255)
                                                                                                           cTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGctgctg                                                                                  >  7:214343/1‑107 (MQ=255)
                                                                                                           cTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGctgctg                                                                                  <  8:214343/107‑1 (MQ=255)
                                                                                                               ccGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCa                                    >  2:97142/1‑149 (MQ=255)
                                                                                                                               caccacAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTgcgcgc                    >  8:113811/1‑149 (MQ=255)
                                                                                                                                 ccacAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCg                  <  2:134208/149‑1 (MQ=255)
                                                                                                                                  cacaGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCgg                 >  7:187140/1‑149 (MQ=255)
                                                                                                                                          aaaGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGgctgc         >  2:195395/1‑149 (MQ=255)
                                                                                                                                           aaGCCCACCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGgctgct        <  1:389408/149‑1 (MQ=255)
                                                                                                                                           aaGCCCACCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGgctgct        <  1:383457/149‑1 (MQ=255)
                                                                                                                                              cccAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCtgtg     >  2:383014/1‑149 (MQ=255)
                                                                                                                                              cccAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCtgtg     <  4:234675/149‑1 (MQ=255)
                                                                                                                                              cccAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCtgtg     <  8:187140/149‑1 (MQ=255)
                                                                                                                                              cccAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCtgtg     >  1:283724/1‑149 (MQ=255)
                                                                                                                                              cccAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGACAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCtgtg     <  4:239543/149‑1 (MQ=255)
                                                                                                                                                 aGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCgg                                               <  6:97920/104‑1 (MQ=255)
                                                                                                                                                 aGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCgg                                               >  5:97920/1‑104 (MQ=255)
                                                                                                                                                  gCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCTGTGCTc  >  8:316232/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
ATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGGGTGTCGGCGCTCAGTGCCGGGTTGTCCAGCACGTTCAGCGTGCGCGCCGGCAGGCTGCTGTGCTC  >  NC_002947/2303432‑2303725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑