| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,817,201 | G→A | 5.5% | intergenic (+121/+2) | PP_t44 → / ← PP_5526 | tRNA‑Pro/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,817,201 | 0 | G | A | 5.5% | 274.5 / 3.4 | 90 | intergenic (+121/+2) | PP_t44/PP_5526 | tRNA‑Pro/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (35/50); new base A (3/2); total (38/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.51e-01 | |||||||||||
GAGTGTTCGAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAGGGGGAGCA > NC_002947/2817053‑2817339 | gAGTGTTCGAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATgg < 2:42659/149‑1 (MQ=255)gAGTGTTCGAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGCGCCA‑CT‑GGGCTTTCGTGGCTCCAGATgg < 4:271333/149‑1 (MQ=255) gAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTg > 8:232355/1‑149 (MQ=255) gAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTg > 2:232612/1‑149 (MQ=255) gAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTg > 2:167561/1‑149 (MQ=255) aaTCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGCTGGCTCATCTgg > 4:284003/1‑149 (MQ=255) tCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAg < 4:280513/149‑1 (MQ=255) cACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAgg > 5:83205/1‑149 (MQ=255) cACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTACAGATGATACATATGGAgc > 8:207184/1‑148 (MQ=255) aCTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAgg < 6:201584/148‑1 (MQ=255) aCTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAgg < 1:189705/148‑1 (MQ=255) tCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGa < 6:293052/144‑1 (MQ=255) tCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGa > 5:293052/1‑144 (MQ=255) cGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGgttgt > 5:19791/1‑149 (MQ=255) cGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGAGCCATCTGGAgccacga < 7:207184/149‑7 (MQ=255) cctaCCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCg < 1:48702/146‑1 (MQ=255) ccGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTc < 3:80101/148‑1 (MQ=255) cGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCgg < 8:158890/149‑1 (MQ=255) aCCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGga < 1:150025/149‑1 (MQ=255) aCCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGga < 2:365172/149‑1 (MQ=255) cAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCgg > 8:80193/1‑145 (MQ=255) aaaaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑TGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGAt < 5:32383/149‑1 (MQ=255) aaaaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGgaga > 1:72363/1‑148 (MQ=255) aaaaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGAt < 6:370991/149‑1 (MQ=255) aaaaaaCCCTAGAAAATCCAGTCACGTAACGGTGACTGGATTTTTTTATGGGTGATGGGTTTCTGTCTCGCTCGAATTTTGTGGCACTTTTTGTGCCA‑CT‑GGGCGTTCGTGGCTGCAGATGGGTCATCTGGAGGGTTGTTTCGGGAGAt > 8:288694/1‑149 (MQ=255) aaaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATa < 1:232612/149‑1 (MQ=255) aaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCGAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATa > 8:167151/1‑148 (MQ=255) aaaaCCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATa > 7:124915/1‑148 (MQ=255) ccTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGAGCCATCTGGAgc > 1:1456/1‑126 (MQ=255) ccTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGAGCCATCTGGAgc < 2:1456/127‑2 (MQ=255) ataaaaaaaTCCAGTCACCGTTAAGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTc > 4:121764/6‑149 (MQ=38) cTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCg > 7:266700/1‑149 (MQ=255) tAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGt > 6:392439/1‑149 (MQ=255) gAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTg < 2:77459/148‑1 (MQ=255) aaaTCGAGTCACTTTCCGGTGACTGGATTTTTTTATGCCTGATGGGTTTCTGTCTCGCTCTAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCGTTCGTGGCGCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGCTACAGCTCGTTCt < 6:99084/148‑1 (MQ=255) tCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGATTTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTc < 1:167561/149‑1 (MQ=255) aGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTc > 8:277697/1‑149 (MQ=255) gTCACTTAACGTTGACTGGATTTTTTTATGCCTTATGGTTTTCTGTCTCGCTCGAATTTTGTTCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCGCCAGATGGCTCATCTGTAGGGTTGTTTCTGTAGATACATCTCGTGCTGTTCCTCg < 4:176115/149‑1 (MQ=255) gTCACTTAACGGTGACTGGATTTTTTTATGCGTGATGGTTTTCTGTCTCGGTCGATTTTTGTGCAACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGTAGGTTTGTTTCGGGAGATACAGCTCGTGCTGTTCATCg > 8:308808/1‑149 (MQ=255) aCTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATc < 6:102426/105‑1 (MQ=255) aCTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATc > 5:102426/1‑105 (MQ=255) cTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGcc > 5:228688/1‑147 (MQ=255) cTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTa < 6:83205/149‑1 (MQ=255) cTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTa < 7:72204/149‑1 (MQ=255) aaCGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAg < 7:132863/147‑1 (MQ=255) gTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGAt > 5:221058/1‑146 (MQ=255) gTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAg > 2:56827/1‑149 (MQ=255) tGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGc < 6:228688/149‑1 (MQ=255) aCTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCa < 7:80193/148‑1 (MQ=255) tGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCAtct > 3:317238/1‑149 (MQ=255) ttttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGc < 1:46532/119‑1 (MQ=255) ttttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGc > 2:46532/1‑119 (MQ=255) ttttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCaa < 7:288694/148‑1 (MQ=255) ttttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTAGCCTAGGATAAGCATCTcc > 7:70151/1‑146 (MQ=255) tttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAg < 5:392439/148‑1 (MQ=255) ttttATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGa < 1:56827/148‑1 (MQ=255) tATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCGTCGCCTAGGATAAGCATCTCCAAGACCt < 5:118068/148‑1 (MQ=255) tATGCCTGATGGATTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCt > 6:118068/1‑148 (MQ=255) aTGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCtt < 3:121764/148‑1 (MQ=255) tGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTg < 7:277697/148‑1 (MQ=255) tGCCTGATGGGTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCGCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTg < 8:96052/148‑1 (MQ=255) ccTGATGGTTTCCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGCTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGt < 4:272639/148‑1 (MQ=255) cttttgtttttCTGTCTCGCTCTATTTTTGTGCGACTTTTTGTGCCATCTACGACTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTgg < 1:319801/141‑1 (MQ=255) aTGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCt < 7:232355/147‑1 (MQ=255) aTGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTgg < 3:284003/149‑1 (MQ=255) tGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTg < 2:76578/141‑1 (MQ=255) tGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGa < 8:116929/149‑1 (MQ=255) tGGTTTTCTGTCTCGCTCGAATTTTGTGCAACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCAAAGACCTTg > 1:76578/1‑141 (MQ=255) tctcGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGc > 8:237199/1‑149 (MQ=255) ctcgctcgAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGct > 4:316179/1‑149 (MQ=255) gctcgAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGctc < 8:124915/147‑1 (MQ=255) ctcgAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTc < 7:167151/149‑1 (MQ=255) ttgtgccactttttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCt > 7:83267/1‑149 (MQ=255) tgtgccactttttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCtt > 2:201533/1‑149 (MQ=255) gtgccactttttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCtt < 7:237199/148‑1 (MQ=255) tgccactttttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGt > 4:205896/1‑149 (MQ=255) cactttttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCa < 8:266700/149‑1 (MQ=255) ttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCa < 2:374365/130‑1 (MQ=255) ttgtgcca‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCa > 1:374365/1‑130 (MQ=255) a‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGAc > 1:179463/1‑149 (MQ=255) a‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGAc < 3:205896/149‑1 (MQ=255) a‑ct‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGAc < 8:70151/149‑1 (MQ=255) tttCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCtt > 5:132611/1‑114 (MQ=255) tttCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCtt < 6:132611/114‑1 (MQ=255) tCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAgg < 3:316179/147‑1 (MQ=255) tCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAgg < 2:72363/147‑1 (MQ=255) cGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAgggg < 4:69111/148‑1 (MQ=255) gTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAGGGGGa < 6:19791/149‑1 (MQ=255) gTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAGGGGGa < 6:221058/149‑1 (MQ=255) ccTCCAGATGAGCCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATATGCATCTACAACACGTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAGGGGGAGca > 5:393388/2‑149 (MQ=255) ccAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCt > 6:29368/1‑87 (MQ=255) ccAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCt < 5:29368/87‑1 (MQ=255) | GAGTGTTCGAATCACTCCGTCCCGACCAAAAAACCCTAGAAAATCCAGTCACTTAACGGTGACTGGATTTTTTTATGCCTGATGGTTTTCTGTCTCGCTCGAATTTTGTGCCACTTTTTGTGCCA‑CT‑GGGCTTTCGTGGCTCCAGATGGCTCATCTGGAGGGTTGTTTCGGGAGATACAGCTCGTGCTGTTCCTCGCCTAGGATAAGCATCTCCAAGACCTTGGTTCTGGATAGCTGGTGCTCTTCAGCAAGCTTGTCCAGGAGCGCATTGACGCTCAGGGGGAGCA > NC_002947/2817053‑2817339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |