| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,829,972 | T→G | 5.6% | H192Q (CAT→CAG) | PP_2482 → | molybdenum cofactor biosynthesis protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,829,972 | 0 | T | G | 5.6% | 257.0 / 4.4 | 82 | H192Q (CAT→CAG) | PP_2482 | molybdenum cofactor biosynthesis protein A |
| Reads supporting (aligned to +/- strand): ref base T (38/38); new base G (2/3); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
TTGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGT > NC_002947/2829824‑2830120 | ttGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAt < 6:104789/149‑1 (MQ=255)ttGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAt < 6:355912/149‑1 (MQ=255) tgtgCAGGCGCGCCGTGCCGGCATGAGCATCAAGATCTACATGGTGCCGTTGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAt < 6:93479/145‑1 (MQ=255) aGCACGTGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCAGGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTg < 5:274735/149‑1 (MQ=255) gcgcgcCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGcc > 2:387555/1‑147 (MQ=255) gcCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCAt > 4:138974/1‑149 (MQ=255) gcCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCAt > 4:7637/1‑149 (MQ=255) cGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatgcgca < 3:194252/149‑7 (MQ=255) gCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGcaca < 1:387555/149‑1 (MQ=255) ccGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAg > 1:292698/1‑149 (MQ=255) cGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAgg < 2:334958/149‑1 (MQ=255) gCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCt > 6:122936/1‑149 (MQ=255) gAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGc > 4:370824/1‑138 (MQ=255) gAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGc < 3:370824/138‑1 (MQ=255) aGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTc < 1:298312/148‑1 (MQ=255) aTCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTTAGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTa > 1:290388/1‑149 (MQ=255) aTCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAc < 5:122936/149‑1 (MQ=255) aTCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAc < 3:7637/149‑1 (MQ=255) aTCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAc < 3:138974/149‑1 (MQ=255) tCAAGATCAACATGGTGCCGATGCGTGGTAGCGAACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGTGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAc > 1:46652/1‑149 (MQ=255) aGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCttt < 6:334579/139‑1 (MQ=255) aGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCttt > 5:334579/1‑139 (MQ=255) tCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAGCTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtc < 4:240603/149‑1 (MQ=255) gTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGc > 6:245897/1‑147 (MQ=255) ccGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAgcg < 6:307937/149‑1 (MQ=255) cGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAgcgc < 2:263978/149‑1 (MQ=255) cGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAgcgc < 8:135253/149‑1 (MQ=255) gATGCGTGGTAGC‑AACCTCGCTCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCAACCAGTAGCGTATTATCGAACTTATGAGCATGGGCCATCTGGCCCAGCATGCACAGGATTTTCCTACCCAGTTCGTCGGCAAgcgc > 7:160283/1‑148 (MQ=255) gATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAgcgc > 8:195327/1‑148 (MQ=255) gTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGctgctg < 3:244999/149‑1 (MQ=255) gTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGctgctg < 7:276766/149‑1 (MQ=255) ctAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGctgctg < 5:379198/148‑1 (MQ=255) tAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTgg < 4:125785/149‑1 (MQ=255) gC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGCGctgctg > 6:379198/1‑146 (MQ=255) gATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCg < 2:292698/148‑1 (MQ=255) aTCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCACCGCGAGCTGCTGGAGCTTATCGGc < 4:381289/149‑1 (MQ=255) tttt‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGc > 4:119266/1‑143 (MQ=255) tttt‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGc < 3:119266/143‑1 (MQ=255) tttt‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCAAGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGt > 1:314511/1‑149 (MQ=255) cccATTTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGc < 5:44472/149‑1 (MQ=255) cccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAcc > 8:314046/1‑99 (MQ=255) cccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAcc < 7:314046/99‑1 (MQ=255) gcATGTTGGAGTTCTGCCCTACTCCGGGCAACGCTCTGCGTTTTATCGAACTTATGCGCCTGGGGCAGCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGGGAGCGTTATGcc < 8:252907/148‑1 (MQ=255) ccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGcc > 3:186409/1‑149 (MQ=255) gTTGGCGTTCTGCCTTCAGTAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAgct < 6:179261/117‑1 (MQ=255) gTTGGCGTTCTGCCTTCAGTAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAgct > 5:179261/1‑117 (MQ=255) gTTCTGCCTTGAGCAGGGCTTCGAGTTGGGTTTTATGGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAGCGAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAgg < 8:160283/149‑1 (MQ=255) gTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTAt > 2:366111/1‑136 (MQ=255) gTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTAt < 1:366111/136‑1 (MQ=255) gTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAgg > 2:266600/1‑149 (MQ=255) tGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCt > 4:163245/1‑147 (MQ=255) gCCTTCAGCAGGGCTACGAGAAGCGATTTATCGAACTTATGCGCAAGGGCCAACTCGCCCAGCATACACAGGCTGATCGTACCCAGTGCGTAGCCCACCGCCAGCTGCTGGAGCTAATCGGCGAGAGGACAGCCTACACCCAGCCTCAg > 8:327979/1‑149 (MQ=255) gcagGGCTACGAGTTGCGTTTTATCGAACTTCTGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCTGCCAGCGCGAGCTGCTGGAGCTTATCGTCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCgg < 6:263025/149‑1 (MQ=255) agGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTa < 2:290388/149‑1 (MQ=255) ggCTAGGAGTTGCGTTTTATCGAACTTCTGCGCATGGTCCATCTGGCCGAGCATGCACAGGCTTTTCGTACCCTGGTCGGCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTTTGCGTTCACCCAGGCTGAGGCGCCGGTAGa < 7:327979/149‑1 (MQ=255) cTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACt > 7:127303/1‑149 (MQ=255) tACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTc > 3:187480/1‑149 (MQ=255) cGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTc < 4:187480/147‑1 (MQ=255) gAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGc > 5:116111/1‑50 (MQ=255) gAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGc < 6:116111/50‑1 (MQ=255) ttttATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGc > 3:199685/1‑149 (MQ=255) ttttATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGc > 4:338087/1‑149 (MQ=255) tATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGt < 5:245897/148‑1 (MQ=255) aTCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTta > 5:229162/1‑149 (MQ=255) tCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTta > 3:357411/1‑148 (MQ=255) tCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTta > 3:106443/1‑148 (MQ=255) tCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTta > 3:163733/1‑148 (MQ=255) gAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAg > 5:345280/1‑149 (MQ=255) gAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAg > 7:98017/1‑149 (MQ=255) aaCTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGc > 2:56132/1‑149 (MQ=255) cTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGt < 4:186409/149‑1 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTg > 7:20885/1‑137 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTg < 8:20885/137‑1 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGtt > 2:86703/1‑149 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGtt > 5:282462/1‑149 (MQ=255) aTGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGtt < 7:285499/147‑1 (MQ=255) atgctGGGCCAGATGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGa > 8:51579/5‑107 (MQ=255) atgctGGGCCAGATGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGa < 7:51579/103‑1 (MQ=255) tgctGGGCCAGATGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAg > 7:31726/4‑149 (MQ=255) aTGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAgcg > 8:242328/1‑149 (MQ=255) gggCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGtt < 3:33679/83‑1 (MQ=255) gggCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGtt > 4:33679/1‑83 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 3:338087/149‑1 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 6:229162/149‑1 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 4:232973/149‑1 (MQ=255) tCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGt > 5:317050/1‑149 (MQ=255) | TTGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGC‑AACCTCGATCAAGTTTT‑GCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGT > NC_002947/2829824‑2830120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |