Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,844,683	A→T	9.1%	intergenic (‑43/+37)	PP_2495 ← / ← PP_2496	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,844,683	0	A	T	9.1%	181.9 / 6.3	66	intergenic (‑43/+37)	PP_2495/PP_2496	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (29/31);  new base T (3/3);  total (32/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01

GCGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGT  >  NC_002947/2844539‑2844829                                                                                                                                                 |                                                                                                                                                    gcGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCTGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGc                                                                                                                                                   <  7:336379/147‑1 (MQ=255)   ggATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCAGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGt                                                                                                                                               >  4:368346/1‑149 (MQ=255)   ggATCTGCAGCCAGTCCTCGCGGGGTAGCTCCATGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGt                                                                                                                                               <  1:70944/149‑1 (MQ=255)          cAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCg                                                                                                                                             <  7:226120/144‑1 (MQ=255)          cAGCCAGTCCGCGCGGGTTAGCGCCTTGGTGCTATCCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCATTGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATCGAAACGCCCGACCCGCTTCGTTGCAGGTCggg                                                                                                                                           <  6:345746/146‑1 (MQ=255)            gCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTa                                                                                                                                      >  3:195541/1‑149 (MQ=255)              cattCCTCGCGGTGTAGCTCCTTGGTGATAACCAGGCGCAGATCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTAt                                                                                                                                     <  6:352077/145‑1 (MQ=255)              cAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATg                                                                                                                                    <  8:251671/149‑1 (MQ=255)               aGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATgg                                                                                                                                   <  7:102049/149‑1 (MQ=255)                   cTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATTGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTg                                                                                                                              >  2:238903/1‑149 (MQ=255)                    tCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCTGGCGtt                                                                                                                                       >  1:42734/1‑140 (MQ=255)                    tCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCGGGCGtt                                                                                                                                       <  2:42734/140‑1 (MQ=39)                        ggggTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTTCTGCGATTCAATGAAGTCGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGAtt                                                                                                                         <  3:208283/149‑1 (MQ=255)                         tggTAGCTCCTTGGTTCTAACCAGGCGCAGAGCGTGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTg                                                                                                                        <  4:195541/148‑1 (MQ=255)                               cTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTaaaa                                                                                                                  <  8:361167/149‑1 (MQ=255)                                tCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAg                                                                                                                 >  2:312749/1‑149 (MQ=255)                                tCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAg                                                                                                                 >  6:377094/1‑149 (MQ=255)                                    tGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGt                                                                                                               >  1:9527/1‑147 (MQ=255)                                      gcgCTAACCAGGCGCAGAGCGGGACGGATTTTGCGGGGGCTGCGATTCAATGAAGTCGCTTTCATAGTGTTCACCTTCCAGAAATAGAAACGCCCGACCTGCAACGCAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAg                                                                                                            <  4:214264/146‑1 (MQ=255)                                      gTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAgg                                                                                                           >  3:262157/1‑149 (MQ=255)                                          tAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCggg                                                                                                                                                <  2:328678/109‑1 (MQ=255)                                            aacAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCAAAGTGTTAACATTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGaga                                                                                                      >  6:340007/3‑146 (MQ=255)                                              cAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAAt                                                                                                   >  6:354247/1‑149 (MQ=255)                                                 gcgcAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGc                                                                                                <  5:377094/149‑1 (MQ=255)                                                  cgcAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCa                                                                                               <  1:312749/149‑1 (MQ=255)                                                  cgcAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCa                                                                                               <  2:24352/149‑1 (MQ=255)                                                           ggACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTAt                                                                                      <  5:138477/149‑1 (MQ=255)                                                            gACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTAt                                                                                      >  7:52837/1‑148 (MQ=255)                                                            gACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATc                                                                                     <  3:11683/149‑1 (MQ=255)                                                                 aTTTTGCTGGTCCTGCGATTCAATGAAGTGGCTTTCATTGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAgg                                                                                <  1:238903/149‑1 (MQ=255)                                                                  ttttGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGgc                                                                               >  3:338354/1‑149 (MQ=255)                                                                  ttttGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGgc                                                                               <  3:135928/149‑1 (MQ=255)                                                                  ttttGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGgc                                                                               >  6:137199/1‑149 (MQ=255)                                                                                 gATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTg                                                                <  7:103171/149‑1 (MQ=255)                                                                                            gTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCAAAGGCGCGTTGCTTGATTTGGGCACCCTGGc                                                     <  8:52837/149‑1 (MQ=255)                                                                                               gCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCg                                                   >  8:12904/1‑148 (MQ=255)                                                                                                 tttCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGc                                                                        <  5:27322/125‑1 (MQ=255)                                                                                                 tttCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGc                                                                        >  6:27322/1‑125 (MQ=255)                                                                                                   tCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAcc                                               <  4:262157/148‑1 (MQ=255)                                                                                                   tCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAc                                                >  8:237374/1‑147 (MQ=255)                                                                                                   tCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAc                                                <  4:338354/147‑1 (MQ=255)                                                                                                       aGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCg                                          >  5:78800/1‑149 (MQ=255)                                                                                                        gtgtTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCg                                          <  3:368346/148‑1 (MQ=255)                                                                                                          gtTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGa                                        <  3:215381/148‑1 (MQ=255)                                                                                                              aCCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCt                                                                       >  2:346479/1‑113 (MQ=255)                                                                                                              aCCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCt                                                                       <  1:346479/113‑1 (MQ=255)                                                                                                              aCCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTc                                     >  1:105439/1‑147 (MQ=255)                                                                                                              aCCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTc                                     >  6:200663/1‑147 (MQ=255)                                                                                                              aCCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGAATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTc                                     >  8:157525/1‑147 (MQ=255)                                                                                                               ccTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAg                                  >  2:220285/1‑149 (MQ=255)                                                                                                                    cAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGt                             <  2:9527/149‑1 (MQ=255)                                                                                                                     aGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTa                            >  7:272969/1‑149 (MQ=255)                                                                                                                       aaaTAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTAtt                          <  5:354247/149‑1 (MQ=255)                                                                                                                          tAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCgg                       >  5:210552/1‑149 (MQ=255)                                                                                                                                cGCCCGACCCGCTTCGTTGCAGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgctgc                 >  8:175516/1‑149 (MQ=255)                                                                                                                                 gCCCGACCCGCTTCGTTGCAGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgctgc                 >  7:362194/1‑148 (MQ=255)                                                                                                                                 gCCCGACCCGCTTCGTTGCAGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgctgc                 <  8:362194/148‑1 (MQ=255)                                                                                                                                  cccGACCTGCAACGAAGCGGGTCGGGCGTTATGGGTGGGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCg                >  1:57988/1‑149 (MQ=255)                                                                                                                                  cccGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGt               <  7:12904/149‑1 (MQ=255)                                                                                                                                  cccGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGt               >  8:345497/1‑149 (MQ=255)                                                                                                                                  cccGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGt               >  5:326076/1‑149 (MQ=255)                                                                                                                                  cccGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGGCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGt               <  5:239058/149‑1 (MQ=255)                                                                                                                                   ccGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTg              <  5:137199/149‑1 (MQ=255)                                                                                                                                        cTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCccgc         >  8:186792/1‑149 (MQ=255)                                                                                                                                          gCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCccgccg       >  3:203893/1‑149 (MQ=255)                                                                                                                                               gAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGt  >  5:364100/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GCGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGG‑GTGGGATTGGTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGT  >  NC_002947/2844539‑2844829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑