| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,869,104 | T→A | 7.3% | intergenic (+643/‑288) | PP_2520 → / → PP_2522 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,869,104 | 0 | T | A | 7.3% | 236.9 / 6.2 | 81 | intergenic (+643/‑288) | PP_2520/PP_2522 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base T (33/42); new base A (3/3); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAACCCTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGCT > NC_002947/2868961‑2869249 | gCAACCCTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTAACTGAAGTAACTgc < 2:284036/149‑1 (MQ=255) cAACCCTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTgcg < 1:280381/149‑1 (MQ=255) ccTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACt > 7:334912/1‑149 (MQ=255) cTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTg > 4:123046/1‑149 (MQ=255) cTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTg > 2:231075/1‑149 (MQ=255) acttcgggATCAATACCCGGGGCGCTGATTGGGAATTTCTGTGTCGCGCGCGCAACGCTGCCATGGCGTACCTGTTGCAGTCATTTGGCAACTTCCTTCACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGc < 2:266815/140‑1 (MQ=255) caTCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCaaa > 8:215647/1‑149 (MQ=255) ctcGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATg > 5:87731/1‑148 (MQ=255) ctcGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCAGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATg > 7:7042/1‑148 (MQ=255) gATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACt < 7:75841/149‑1 (MQ=255) cAATACCCGGGTCGCTGAATCGGAATATCAGATTCGCGCGCGCAACGCTGCCATGGCGTACCAGATGCACTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGAGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGca > 7:155634/1‑148 (MQ=255) aaTACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCt > 5:175776/1‑149 (MQ=255) aTACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTg < 8:334912/149‑1 (MQ=255) cccGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGAc < 8:54796/149‑1 (MQ=255) cccGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGAc < 3:242888/149‑1 (MQ=255) gCTGATTCGTAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGcgcg < 7:336105/149‑1 (MQ=255) cTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCgg < 1:257314/149‑1 (MQ=255) cTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCgg > 4:43349/1‑149 (MQ=255) tGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATg < 2:342380/127‑1 (MQ=255) tGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATg > 1:342380/1‑127 (MQ=255) aTTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCggg < 1:231075/147‑1 (MQ=255) cGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTc > 2:60191/1‑149 (MQ=255) ggAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCt < 2:309815/149‑1 (MQ=255) actatCAGTTGCGCGCGCGCAACGCTGCCAGGGCGTACCTGATGCAGTCCTTTGGCAACTTCCATAACGAGGGCGAGACGGGGCTGCGCAGTTCCTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGc < 5:285671/147‑1 (MQ=255) aGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCt < 7:216021/148‑1 (MQ=255) tttCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCt > 8:82660/1‑139 (MQ=255) tttCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCt < 7:82660/139‑1 (MQ=255) tttCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGc < 7:342187/149‑1 (MQ=255) tttCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGc > 5:367386/1‑149 (MQ=255) ctggcAACGCTGCCTAGGCGTACCTTTTGGAGTCAGTTGTCAATTTCCTTAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCATTTACTGCGCACTGCAAATGAACTGCCTGGAGCTGGCGCGGGCATTCTGCTTCGTTGCCAatgat < 8:155634/146‑1 (MQ=255) cgcgcAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAatgat < 2:349374/149‑1 (MQ=255) cgcgcAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAatgat < 8:3048/149‑1 (MQ=255) gcgcAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTTCAAATGAACTGCCTGTACCTGGCTCGGGCATTCTGCTTCCTGGCCAatgatg < 1:282740/149‑1 (MQ=255) aaCGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTTCTTCAGTTACTGCGCACTGCAAATGAACTTCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATCATGGGtt < 6:79181/149‑1 (MQ=255) cTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTg > 6:165721/1‑148 (MQ=255) ccATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCTAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAg < 1:198651/149‑1 (MQ=255) aCCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGc < 6:329671/121‑1 (MQ=255) aCCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCAGTCTGCTTCCTGGc > 5:329671/1‑121 (MQ=255) ccTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTCGACCTGGCGCGGGCATTCTGCTACCTGGCCAATGATGGGTTCTGCAAGAACAGCGGt > 7:192603/1‑148 (MQ=255) cTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGa < 3:43349/149‑1 (MQ=255) tGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCTGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAg < 7:25518/149‑1 (MQ=255) gCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGa < 1:7296/144‑1 (MQ=255) gCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGa > 2:7296/1‑144 (MQ=255) gTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATcc > 2:56736/1‑149 (MQ=255) gTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATcc < 1:60191/149‑1 (MQ=255) aTTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCaa < 6:200595/126‑1 (MQ=255) aTTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCaa > 5:200595/1‑126 (MQ=255) aTTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGc < 6:294271/128‑1 (MQ=255) aTTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGc > 5:294271/1‑128 (MQ=255) cAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACgcggc > 3:296862/1‑149 (MQ=255) ttCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGAc < 3:310557/140‑1 (MQ=255) ttCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGAc > 4:310557/1‑140 (MQ=255) ttCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGgcgc > 2:314913/1‑147 (MQ=255) ccATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCa < 3:123046/147‑1 (MQ=255) ccATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGa > 8:71186/1‑149 (MQ=255) cATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGa < 6:87731/148‑1 (MQ=255) cATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAc < 4:296862/149‑1 (MQ=255) tAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAccc < 1:168634/149‑1 (MQ=255) tAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAccc < 8:7042/149‑1 (MQ=255) tAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAcc > 6:38243/1‑148 (MQ=255) tAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGAATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAcc > 3:360226/1‑148 (MQ=255) aaCGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGAccc > 6:33473/1‑148 (MQ=255) cGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCcaac < 6:367386/149‑1 (MQ=255) gTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGt < 6:175776/149‑1 (MQ=255) tCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTg < 5:33473/149‑1 (MQ=255) gagaCGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGaa > 1:10216/1‑149 (MQ=255) tgcGCAGTAACTGAAGTAACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATg > 3:253438/1‑149 (MQ=255) tgcGCAGTAACTGAAGTAACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCAGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATg > 7:336240/1‑149 (MQ=255) cgcAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGc > 6:372654/1‑149 (MQ=255) gcAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCcaacaa < 3:165269/131‑1 (MQ=255) gcAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCcaacaa > 4:165269/1‑131 (MQ=255) gcAGTAACTGAAGTAACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGc > 3:332442/1‑148 (MQ=255) aGTTAATTCAGTTACTGCGCACTGCAAATGAACTGCCTGGAACTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGccac < 3:45692/149‑1 (MQ=255) aCTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGc > 2:233756/1‑149 (MQ=255) ttCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCgg > 6:209965/1‑149 (MQ=255) cAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCggg < 1:56736/148‑1 (MQ=255) aaGTAACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCggg < 4:253438/147‑1 (MQ=255) aaGTAACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCAGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGc < 8:336240/148‑1 (MQ=255) aGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGc < 5:38243/148‑1 (MQ=255) aGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGCt > 7:309253/1‑149 (MQ=255) aGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGCt < 6:155568/149‑1 (MQ=255) | GCAACCCTCACATCTCGATCAATACCCGGGTCGCTGATTCGGAATATCAGTTTCGCGCGCGCAACGCTGCCATGGCGTACCTGATGCAGTCATTTGGCAACTTCCATAACGAGGTCGAGACGGTGCTGCGCAGTTACTTCAGTTACTGCGCACTGCAAATGAACTGCCTGGACCTGGCGCGGGCATTCTGCTTCCTGGCCAATGATGGGTTCTGCAAGCACAGCGGTGAGCAGATCCTGACGCGGCGCCAGACCCAACAAGTGAACTCGATCATGGCCACCAGCGGGCT > NC_002947/2868961‑2869249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |