| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,871,014 | T→A | 6.7% | intergenic (+321/‑209) | PP_2522 → / → PP_2524 | transposase/HD domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,871,014 | 0 | T | A | 6.7% | 257.1 / 5.5 | 84 | intergenic (+321/‑209) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (43/35); new base A (4/2); total (47/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCC > NC_002947/2870869‑2871160 | ggTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑Ag > 7:334717/1‑149 (MQ=255) ttCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑a > 4:228071/1‑144 (MQ=255) ttCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑a < 3:228071/144‑1 (MQ=255) cTGATCAGCGAACTCAGGGGCAATCAGGCTTCGCCTTGGCGGGTCAGAACGCGTATACCAAAGTGGCCGTGGAGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGt > 5:201228/1‑149 (MQ=255) aTCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGGGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGt < 6:275984/146‑1 (MQ=255) gCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGCCGCTGCGTGGGCTGCCATACCAGCGGGTAACCGCCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGAC‑AGCCAGGTGCTGTCg > 2:310915/1‑149 (MQ=255) gCGAACTCAGGGGCAAACAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCg > 7:305484/1‑149 (MQ=255) tCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATg > 8:1491/1‑149 (MQ=255) tCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGAGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTCTC‑AGCAAGGTGCTGTCGGAGATg > 4:233507/1‑149 (MQ=255) aGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGtc > 2:57071/1‑149 (MQ=255) gggCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGAt > 4:376909/1‑144 (MQ=255) gggCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGAt < 3:376909/144‑1 (MQ=255) gggCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATg < 1:20006/145‑1 (MQ=255) gggCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATg > 2:20006/1‑145 (MQ=255) gCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCAc > 4:334256/1‑149 (MQ=255) cAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCAcc < 1:4732/149‑1 (MQ=255) aaTCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCAccc > 1:226276/1‑149 (MQ=255) ggCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCa < 5:197221/149‑1 (MQ=255) tCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCAcccc < 3:61285/149‑1 (MQ=255) gCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCa > 4:164430/1‑148 (MQ=255) cTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAg < 7:1491/149‑1 (MQ=255) ggCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAgg < 3:360849/147‑1 (MQ=255) ggCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCt > 5:21340/1‑149 (MQ=255) cGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTg > 7:286175/1‑148 (MQ=255) tCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGa > 7:119126/1‑148 (MQ=255) aaCGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTTGCTGAC‑AGc > 6:157135/1‑98 (MQ=255) aaCGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTTGCTGAC‑AGc < 5:157135/98‑1 (MQ=255) gTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTgg < 3:334256/149‑1 (MQ=255) ataCCAACGTGGCCGTGGAGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTgg < 8:334717/147‑1 (MQ=255) taCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAg > 3:353315/1‑149 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGGTGCCATACCAGCGGGTATCCGGGGTTGTCCATTTTCTGATTTCTCGCACC‑TGCTGTCAAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCa < 1:310915/148‑1 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTgg < 8:304505/145‑1 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTgg > 7:304505/1‑145 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAg > 7:122187/1‑148 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAg > 2:203560/1‑148 (MQ=255) aCCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTAGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAg > 5:214795/1‑148 (MQ=255) ccAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTg < 8:337639/93‑1 (MQ=255) ccAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTg > 7:337639/1‑93 (MQ=255) ggccgtggcGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATccc > 5:296708/1‑149 (MQ=255) cgtggcGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCAt > 8:275672/1‑149 (MQ=255) gcgcTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGca > 6:281626/1‑149 (MQ=255) cgcTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGcac < 4:353315/149‑1 (MQ=255) gcTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGcaca > 8:68359/1‑149 (MQ=255) cGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACaa < 1:57071/148‑1 (MQ=255) gTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGTTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAgg < 5:300302/149‑1 (MQ=255) gCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGGTATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGgctgc > 1:263595/1‑149 (MQ=255) gCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGgctgc < 8:305484/149‑1 (MQ=255) tGCCATACCAGCGTGTATCCGGCTTTGTCCATTTTCTGATATCTCGCACC‑TTCTGTC‑ATCAATGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTc < 3:233507/149‑1 (MQ=255) tGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCg > 1:196217/1‑72 (MQ=255) tGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCg < 2:196217/72‑1 (MQ=255) ccAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGc > 1:35074/1‑94 (MQ=255) ccAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGc < 2:29130/94‑1 (MQ=255) ccAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGc < 2:35074/94‑1 (MQ=255) ccAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGc > 1:29130/1‑94 (MQ=255) ccAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCGGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAg < 8:286175/149‑1 (MQ=255) cAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCCTAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt > 7:257147/1‑149 (MQ=255) cAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt < 6:21340/149‑1 (MQ=255) cAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGATGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATccc > 3:15109/1‑121 (MQ=255) cAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGATGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATccc < 4:15109/121‑1 (MQ=255) gCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGc < 2:226276/149‑1 (MQ=255) ggCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCg > 1:363719/1‑149 (MQ=255) gCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGt < 8:119126/149‑1 (MQ=255) ttGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTg > 5:148967/1‑148 (MQ=255) gTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGACTTGGCAGTAACATCCCCATCGCACACAAGCCTGCTCCTGCCAGTGCTGTACAGGCGTTGaaa > 3:149454/1‑149 (MQ=255) tCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGaaa < 6:296708/148‑1 (MQ=255) tCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGaaa < 7:68359/148‑1 (MQ=255) tCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAAc > 2:158609/1‑149 (MQ=255) gaTTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAAcc < 6:214795/147‑1 (MQ=255) aTTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGa < 3:164430/149‑1 (MQ=255) tGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGc < 7:289854/132‑1 (MQ=255) tGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGc > 8:289854/1‑132 (MQ=255) tGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATg > 7:259086/1‑147 (MQ=255) tatatatCGCACC‑TGCTGTC‑AGCAAGGAACTATCCAAGAACTCACACAACAGAACCCAATAGCCTCAATAAAAGCATTTGCAGAAACATACCCATCTCACCAAAAGCTGCACCTGCCAGTTCTGTAAAGGCATTAAAACCCACATGAAg > 4:175342/2‑149 (MQ=255) atatCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCa < 1:158609/147‑1 (MQ=255) atatCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAgg > 1:148937/1‑149 (MQ=255) ctcGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACGGACATGCAGGctct > 4:304063/1‑149 (MQ=255) ctcGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGCctct > 5:236125/1‑149 (MQ=255) cGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGctctct > 4:217448/1‑149 (MQ=255) agCACCTTGCTGAC‑AGC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGctctct > 5:335937/2‑149 (MQ=255) gCACCTTGCTGAC‑AGC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGa < 8:243145/128‑1 (MQ=255) gCACCTTGCTGAC‑AGC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGa > 7:243145/1‑128 (MQ=255) gCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGctct < 4:333333/146‑1 (MQ=255) gCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTg < 3:217448/149‑1 (MQ=255) gctgTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTg > 6:186132/1‑149 (MQ=255) tC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGcc < 2:148937/147‑1 (MQ=255) | GGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACC‑TGCTGTC‑AGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCC > NC_002947/2870869‑2871160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |