| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,885,054 | T→G | 5.5% | R173R (CGT→CGG) | PP_2540 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,885,054 | 0 | T | G | 5.5% | 220.7 / 4.2 | 73 | R173R (CGT→CGG) | PP_2540 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (30/39); new base G (2/2); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.42e-01 | |||||||||||
AGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAGGCGCGGCGCAAGGCAATTCCGGCGTCGCGTTTTG > NC_002947/2884910‑2885199 | aGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTgg > 6:95877/1‑149 (MQ=255) gATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTgg < 8:318581/148‑1 (MQ=255) gcatggcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGCCAGACG‑‑CTGCTGCCG‑GGc < 3:276078/149‑1 (MQ=255) catggcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCt > 4:309797/1‑149 (MQ=255) atggcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTg > 8:172980/1‑149 (MQ=255) atggcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTg > 6:142599/1‑149 (MQ=255) gcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCaa > 3:112584/1‑149 (MQ=255) gcCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCaa > 7:319058/1‑149 (MQ=255) gAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAAtgt < 7:128429/149‑1 (MQ=255) gAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAAtgt < 7:311456/149‑1 (MQ=255) gCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGa < 3:85700/149‑1 (MQ=255) cGTTGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGa < 7:341848/148‑1 (MQ=255) cGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGa > 7:256186/1‑148 (MQ=255) cGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGa < 8:256186/148‑1 (MQ=255) ttGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTcaa < 3:369524/148‑1 (MQ=255) atatCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTggg < 6:204735/149‑1 (MQ=255) tatCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCTGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCCGCGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTggg < 1:106770/149‑1 (MQ=255) tCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGc < 7:172980/148‑1 (MQ=255) cACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGt > 5:329768/1‑149 (MQ=255) cACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGt > 3:133407/1‑149 (MQ=255) cACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGt > 6:177090/1‑149 (MQ=255) aCCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGtt < 2:171603/149‑1 (MQ=255) ccTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑TGCTGCAATGTGACACTCAACAGCCTGTTGCCTGGGGGGTTc > 8:124510/1‑149 (MQ=255) ccTCCGGCGCGGTGAAGGCACCGATCGACATGCGGGGTTTATCCAACGGTGCGCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTc < 7:176857/149‑1 (MQ=255) cTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAGTAAGGCTGGGG‑GGCGGGAATGTGACACACAAAAACCAGTTTACGGGGGCGtg > 1:319579/1‑148 (MQ=255) cTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGAGACTCAACAACCTGTTGCCTGGGGCGTTc > 7:327732/1‑148 (MQ=255) cTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTc > 3:316781/1‑124 (MQ=255) cTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTc < 4:316781/124‑1 (MQ=255) ccGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGCCAGACG‑‑CTGCTGCCG‑GGc > 2:118231/1‑107 (MQ=255) ccGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGCCAGACG‑‑CTGCTGCCG‑GGc < 1:118231/107‑1 (MQ=255) cggcggGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCACTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGaca < 7:124510/149‑1 (MQ=255) gcgcGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACg > 1:213105/1‑149 (MQ=255) aaGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCt < 2:213105/149‑1 (MQ=255) cACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCaa < 3:309797/149‑1 (MQ=255) aCCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTcaa < 2:167689/108‑1 (MQ=255) ccGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCaaaa < 2:39947/149‑1 (MQ=255) tCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGAcc < 3:83831/149‑1 (MQ=255) aCATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGc < 3:51713/138‑1 (MQ=255) aCATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGc > 4:51713/1‑138 (MQ=255) aCATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCtt > 6:66116/1‑148 (MQ=255) aCATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCtt > 7:349964/1‑148 (MQ=255) aTGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGaa < 6:308402/149‑1 (MQ=255) tGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCt > 2:350765/1‑149 (MQ=255) ggTTTATCCCACGGTGCCGGCAGTGTCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCT‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGc < 8:327732/149‑1 (MQ=255) tttATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCgg < 5:142599/149‑1 (MQ=255) tttATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCgg > 6:257215/1‑149 (MQ=255) aTCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGggt < 6:301850/148‑1 (MQ=255) tCCATCGGTGCAGGCAGTGTCCTGACCGGATTCATTGACGGCCTGGCC‑CGGCAGCAG‑‑CGTCTTGCG‑GGATGCAATGTGACAGTCAACAACCTGTTGCCTGGTGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAATGCTGCGggtg < 7:192245/148‑1 (MQ=255) tCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGggtgg < 8:349964/149‑1 (MQ=255) tCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGggtg < 1:321974/148‑1 (MQ=255) cAACGGTGCCCGCAGTGGGCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACTGCGCGCCTGCAAAAGACCTTGAAGGCTGCGggtggt < 2:173266/148‑1 (MQ=255) aCGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGAt < 6:281386/149‑1 (MQ=255) gTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCATGCAAAAGACCTTGAAGTCTGCGGGTGGTGAtgtg < 4:112584/149‑1 (MQ=255) tGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTgg < 5:95877/149‑1 (MQ=255) cccGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGgcgc > 3:377490/1‑108 (MQ=255) cccGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGgcgc < 4:377490/108‑1 (MQ=255) cccGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGaa < 2:319579/149‑1 (MQ=255) cccGCAGTGGCATGACCGGATTAATTGCCTGCCTGGCA‑AGGCAGCAG‑‑CGTCTGGCG‑GGCTGAAATGTGACACTCAACAACATGTTGCATGGGGCGTTCGACACGTCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGaa > 6:191675/1‑149 (MQ=255) tGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTg < 5:177090/149‑1 (MQ=255) gCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGATGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGcc > 4:147714/1‑149 (MQ=255) cTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCGCGGCTGCAATGTGACACTCAACAACCTGTTCCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTgg > 1:275441/1‑137 (MQ=255) cTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTgg < 2:275441/136‑1 (MQ=255) cTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGcc > 5:285072/1‑147 (MQ=255) aCCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAgg < 6:329768/148‑1 (MQ=255) aCCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAgg < 4:133407/148‑1 (MQ=255) tCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCTCAggcgcggcg > 3:311842/1‑148 (MQ=255) aTTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAggcgcggcgc > 2:389261/1‑147 (MQ=255) aTTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAggcgcggcgc > 8:39915/1‑147 (MQ=255) ccGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTgg < 6:19530/120‑1 (MQ=255) ccGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTgg > 5:19530/1‑120 (MQ=255) gCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGGGATGTGGAAGTCACTGCCCAGGCGCGGCGCAAGGCAATTCCGGc > 6:3408/1‑149 (MQ=255) cGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAGGCGCGGCGCAAGGCAATTCCGGCGTc > 3:232957/1‑149 (MQ=255) g‑‑cGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAGGCGCGGCGCAAGGCAATTCCGGCGTCGCGTTTTg < 5:257215/149‑1 (MQ=255) | AGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTCCGGCGCGGTGAAGGCACCGATCGACATGCTGGGTTTATCCAACGGTGCCCGCAGTGGCCTGACCGGATTCATTGCCGGCCTGGCC‑CGGCAGCAG‑‑CGTCTGGCG‑GGCTGCAATGTGACACTCAACAACCTGTTGCCTGGGGCGTTCGACACGGCGCGCCTGCAAAAGACCTTGAAGGCTGCGGGTGGTGATGTGGAAGTCACTGCCCAGGCGCGGCGCAAGGCAATTCCGGCGTCGCGTTTTG > NC_002947/2884910‑2885199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |