| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,300,854 | G→A | 7.7% | S18F (TCC→TTC) ‡ | lpxH ← | UDP‑2,3‑diacylglucosamine hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,300,854 | 0 | G | A | 7.7% | 222.3 / 6.2 | 78 | S18F (TCC→TTC) ‡ | lpxH | UDP‑2,3‑diacylglucosamine hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (33/39); new base A (4/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.66e-01 | |||||||||||
TCGCTCAGCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGAT > NC_002947/3300707‑3300992 | tCGCTCAGCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGACATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGa < 3:251442/149‑1 (MQ=255) gCTCAGCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGaaa < 8:299301/149‑1 (MQ=255) ccGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCg > 2:274875/1‑149 (MQ=255) aTGGCCTGGCAGATCGAGTGCTGGCAGGGCGGCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCACGGATGTACAGGGCCTTGGCTTGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGATATTTCCCGGGCGttt < 6:209747/149‑2 (MQ=255) aTGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttc < 5:289217/149‑1 (MQ=255) cTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTTGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttc > 6:366057/1‑144 (MQ=255) cTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTTGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGttc < 5:366057/144‑1 (MQ=255) tGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTg > 2:169935/1‑149 (MQ=255) gCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTg > 1:115866/1‑147 (MQ=255) gCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTg < 6:201449/147‑1 (MQ=255) gATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGt > 2:305854/1‑149 (MQ=255) aTCGACTGCTGGAAGGGCGTCATTGCATCGTCTCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTg < 6:267179/149‑1 (MQ=255) tCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCgg > 1:242380/1‑130 (MQ=255) tCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCgg < 2:242380/130‑1 (MQ=255) aCTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTg > 2:100375/1‑145 (MQ=255) ctgctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagat < 6:160730/149‑1 (MQ=255) tgctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagat > 1:352078/1‑148 (MQ=255) ctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcag < 4:53818/149‑1 (MQ=255) ctgGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagat > 5:209599/1‑146 (MQ=255) gAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagag < 6:248222/148‑1 (MQ=255) aaGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCATGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatca > 5:41429/1‑144 (MQ=255) aGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagat > 7:65451/1‑148 (MQ=255) gggCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCTGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatca < 1:274875/149‑1 (MQ=255) ggCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag < 6:278809/149‑1 (MQ=255) gCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag > 5:123679/1‑148 (MQ=255) cGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag > 6:170369/1‑147 (MQ=255) gTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGGAGATCTAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatca < 2:338035/138‑1 (MQ=255) gTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatca > 1:338035/1‑138 (MQ=255) tGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAAt > 1:245/1‑148 (MQ=255) cATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACt < 1:169935/149‑1 (MQ=255) gtcgCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAAt > 7:84466/1‑149 (MQ=255) tcgCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCa > 5:387437/1‑146 (MQ=255) tcgCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCa < 6:387437/146‑1 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag < 1:62723/132‑1 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag > 2:62723/1‑132 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGAGGTACAGGGCCTTGGCATGGCGGGGGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatca > 8:248323/1‑124 (MQ=255) gCCAATCCACGCTTCGAAGAAGTCACCAAGGACGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatca < 7:248323/124‑1 (MQ=255) aaTCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCTGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGTGAAATATCCGGGCGTTCTTCTTGCA‑‑GGAGCAGATCAGAGATCAGCAGAATCACTCAATGAactc > 2:225200/1‑149 (MQ=255) aTCCACGCTTCGAAGAATTCACAAAGGATGTACAGGGCCTTGGCATGGCGCTCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCAGCGCGTTCTTCTTGAA‑‑GGTCCAGAACAGAGATCAGCAGAATcaatcaatatatcg > 6:377985/1‑142 (MQ=255) aTCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCaa < 5:377985/141‑1 (MQ=255) cACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCt < 5:170369/149‑1 (MQ=255) cGCTTCGAAGAAGTCACCAAGGTTGTACATGGCCTTGGCATGGCTGGCGCGGCCATCGAGGAGATCAAGAAACGCCCGGGAAATATCCGTGCGTTCTTCTTGCA‑‑GGTGCATATCAGAGATCAGCAGAATCACTCAATGATCTCGGCttt < 1:225200/149‑1 (MQ=255) ctaagaagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGTCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTtctc < 5:346085/145‑1 (MQ=255) gtagaagTCACCAAGGATGTACAGGGCCTTTGCATTGGGGGCGCGGCCATCGACCATATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCaga < 8:140945/104‑1 (MQ=255) gaagaaGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTGTTGCA‑‑GGTGCaga > 7:140945/1‑106 (MQ=255) gaagaaGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑TGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgat < 8:65451/149‑1 (MQ=255) gaagaaGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgat > 7:127874/1‑149 (MQ=255) gaagaaGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCgat > 5:38208/1‑149 (MQ=255) aagTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATc < 6:123679/149‑1 (MQ=255) tCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcg > 3:37544/1‑149 (MQ=255) cACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTGCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgt > 4:162472/1‑149 (MQ=255) ccAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag < 4:51389/107‑1 (MQ=255) ccAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCagatcagagatcag > 3:51389/1‑107 (MQ=255) aaGGATGTACAGGGCCTTGGCATTGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCACCGGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCAcgtcg < 1:305854/149‑1 (MQ=255) aaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATc < 4:83418/141‑1 (MQ=255) aaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATc > 3:83418/1‑141 (MQ=255) aaGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACgtcgtc < 6:41429/149‑1 (MQ=255) aGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTcc < 3:195089/149‑1 (MQ=255) aTGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTc < 2:115866/149‑1 (MQ=255) aTGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTc < 3:43511/149‑1 (MQ=255) tACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGt < 6:38208/149‑1 (MQ=255) cAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTAc > 2:149139/1‑149 (MQ=255) cAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTAc < 2:352078/149‑1 (MQ=255) ggCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATAAAGAAACGCCAGGGAAATATCAGGTCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATAAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTc > 4:225125/1‑149 (MQ=255) gCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTcc < 2:245/149‑1 (MQ=255) ggCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCtggt < 8:84466/148‑1 (MQ=255) ggcgCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCttt < 8:127874/149‑1 (MQ=255) ggCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAAc > 5:118423/1‑149 (MQ=255) aTCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTACTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGt > 2:196709/1‑149 (MQ=255) tCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTg < 6:209599/149‑1 (MQ=255) gAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTACTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTgg < 1:196709/148‑1 (MQ=255) aTCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACttt > 5:60109/1‑149 (MQ=255) aagaagaaCGCCCGGATATTTCCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACtttt > 3:214342/7‑149 (MQ=255) aagaaCGCCCGGATATTTCCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACttttt < 2:31779/144‑1 (MQ=255) aagaaCGCCCGGATATTTCCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTc > 3:349011/4‑148 (MQ=255) aagaaCGCCCGGATATTTCCCGGGCGTTCTACTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACttttt > 1:31779/4‑147 (MQ=255) gaaCGCCCGGATATTTCCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGAt > 7:32667/2‑149 (MQ=255) aaCGCCCTGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGAt < 4:37544/148‑1 (MQ=255) | TCGCTCAGCCGGCGCATGGCCTGGCAGATCGACTGCTGGAAGGGCGTCATGGCATCGTCGCCAATCCACGCTTCGAAGAAGTCACCAAGGATGTACAGGGCCTTGGCATGGCGGGCGCGGCCATCGAGCAGATCAAGAAACGCCCGGGAAATATCCGGGCGTTCTTCTTGCA‑‑GGTGCAGATCAGAGATCAGCAGAATCACTCAATGATCTCGGCTTTCTCGATGATCACGTCGTCCTTCGGTACGTCCTGGTGGCCAGCTTTGGAACCGGTGGCCACTTTTTCGAT > NC_002947/3300707‑3300992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |