| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,352,182 | C→T | 9.5% | intergenic (+72/+70) | PP_2947 → / ← PP_2948 | transcriptional regulator MvaT/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,352,182 | 0 | C | T | 9.5% | 170.9 / 7.1 | 63 | intergenic (+72/+70) | PP_2947/PP_2948 | transcriptional regulator MvaT/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (31/26); new base T (2/4); total (33/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.95e-01 | |||||||||||
AGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACGGAGGAAATCA > NC_002947/3352034‑3352330 | aGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGcc > 7:193027/1‑149 (MQ=255) tGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGcctcct < 8:167675/149‑1 (MQ=255) cAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGa < 5:239973/149‑1 (MQ=255) aaCCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAGGCGACGCTGTCGCTTCCCCGaa < 5:118520/149‑1 (MQ=255) aaCCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGa > 2:220428/1‑148 (MQ=255) ccACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAGGCGACGCTGTCGCTTCCTCGaaaa < 8:132982/149‑2 (MQ=255) cacaAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGaaa > 5:146805/1‑147 (MQ=255) acaAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACa < 1:63703/149‑1 (MQ=255) aGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGc > 5:350075/1‑149 (MQ=255) aGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑ctt > 5:240013/1‑147 (MQ=255) gAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGTGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGATACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑Cgtgg < 8:91558/149‑1 (MQ=255) aaTGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑Cgtggg < 1:144534/149‑1 (MQ=255) gAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGtgggtggg > 7:251552/1‑149 (MQ=255) gAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGtgggtggg > 7:31570/1‑149 (MQ=255) aaGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCg < 6:217145/149‑1 (MQ=255) cAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAAt > 6:354943/1‑148 (MQ=255) gggCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGAc < 4:34961/149‑1 (MQ=255) gCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGt < 4:19663/149‑1 (MQ=255) gCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGt > 1:368740/1‑149 (MQ=255) agaagaAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGc > 1:249391/1‑141 (MQ=255) agaagaAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGc < 2:249391/141‑1 (MQ=255) gaagTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTaa < 7:290016/149‑1 (MQ=255) aagTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGAGGAATGAGCTGACGTGGTTaaa > 1:374984/1‑149 (MQ=255) tGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAg > 7:32293/1‑149 (MQ=255) gAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGa < 7:70059/149‑1 (MQ=255) tCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACt < 8:251552/149‑1 (MQ=255) tGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAg > 6:66969/1‑149 (MQ=255) tgCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACCGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCa < 6:350075/148‑1 (MQ=255) tGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCg < 2:33663/149‑1 (MQ=255) gCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGttt > 3:63783/1‑148 (MQ=255) gCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGttt > 5:69301/1‑148 (MQ=255) gCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGttt > 1:352025/1‑148 (MQ=255) cccTCATTGCGCTATCTGAAACGACTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGTATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCa < 1:354190/149‑1 (MQ=255) ccTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACa > 7:345171/1‑112 (MQ=255) ccTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACa < 8:345171/112‑1 (MQ=255) aTTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACt > 3:70416/1‑149 (MQ=255) gcgcTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCg > 6:76490/1‑149 (MQ=255) cgcTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCg > 2:19105/1‑148 (MQ=255) gcTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGt > 7:356604/1‑148 (MQ=255) aTCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGAGACAGCGTCGCCTCCTCGAAACGGGGCGTTCAT‑CGTGGGTGTGCGGTATGAGAGGACGTGGTTATACAGTATGTTTCGGCACTAAGCGGTCAGTGTACGTTGGAATACttgatatat > 8:341893/1‑142 (MQ=255) tGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAAtttt > 2:100798/1‑149 (MQ=255) aaaCGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTgg < 6:146805/149‑1 (MQ=255) aaaCGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTg < 4:63783/148‑1 (MQ=255) ccTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑Cgtgg < 4:120698/60‑1 (MQ=255) ccTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑Cgtgg > 3:120698/1‑60 (MQ=255) ccTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCa < 2:120906/149‑1 (MQ=255) ttGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGc < 2:374984/149‑1 (MQ=255) tttttCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTg > 4:366347/1‑149 (MQ=255) tgtttCGAGGAGGCGACGCTGTCGCTTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTaa > 8:351680/3‑99 (MQ=37) tgtttCGAGGAGGCGACGCTGTCGCTTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTaa < 7:351680/97‑1 (MQ=37) ttttCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGCTGGGCGGAATGAGCTGAAGTGGTTAAAAAGGAAGTTTAGCCAATAAGCGCTCAGTGTCCGTTGAAATACTTCGTAAATTTTGGCATCAGCCGATTgg > 8:240880/1‑149 (MQ=255) tttCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTg < 8:32293/147‑1 (MQ=255) tCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGc < 5:76490/148‑1 (MQ=255) tCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGc < 5:354943/148‑1 (MQ=255) gaggagGCGACGCTGTCGCTTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGa > 5:127100/1‑148 (MQ=255) gAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGa > 2:262188/1‑148 (MQ=255) gAGGAAGCGACAGCGTCGCCTACTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACACGAAGTTTCGAAACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTCGCATCAGCCGATTGGGCGa > 5:137391/1‑148 (MQ=255) aaGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTg < 7:280939/149‑1 (MQ=255) gACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAAc > 3:5156/1‑149 (MQ=255) aCAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACg > 4:379000/1‑149 (MQ=255) gctgTCGCTTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACgga < 6:127100/146‑1 (MQ=255) gCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACggag < 1:220428/149‑1 (MQ=255) gTCTCCTCCTCTAATCAGGGCGTTCAT‑CGTCTGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAATCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTTGCATCAGCCGATTGTGCGACATTGAAACggagg < 7:240880/148‑1 (MQ=255) tCGCCTCCTCGAAACAGGGCGTTCATGCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACggagg > 1:203081/1‑148 (MQ=255) tCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACggagga > 3:341175/1‑148 (MQ=255) cctcctCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACGGAGGAAATc < 8:31570/149‑1 (MQ=255) cctcctCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACGGAGGAAATc < 1:298987/149‑1 (MQ=255) ctcctcGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACGGAGGAAATCa > 5:101882/1‑149 (MQ=255) | AGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTC‑TTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAT‑CGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGGCATCAGCCGATTGGGCGACATTGAAACGGAGGAAATCA > NC_002947/3352034‑3352330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |