| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 205,930 | T→A | 6.3% | V3812V (GTT→GTA) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 205,930 | 0 | T | A | 6.3% | 185.9 / 3.0 | 63 | V3812V (GTT→GTA) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (28/31); new base A (2/2); total (30/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
CCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCT > NC_002947/205782‑206076 | ccGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGtt < 3:229923/149‑1 (MQ=255) gTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTAc < 3:299156/149‑1 (MQ=255) cccccaggTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGc < 1:333541/142‑1 (MQ=255) tACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCAGGTCAGCACGTCGGTTACCG‑ACGAGCCAg > 7:135974/1‑149 (MQ=255) ccGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAgg < 8:48960/148‑1 (MQ=255) tCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACg > 5:299249/1‑149 (MQ=255) ccccGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCggg > 2:295805/1‑148 (MQ=255) aCAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGaa < 7:89108/149‑1 (MQ=255) aaCGTCTACGTCGGTACCAACGACCCTGTGATCAAATAGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCAGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAgg < 8:135974/149‑1 (MQ=255) tCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGAc < 4:1893/149‑1 (MQ=255) cGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTg < 8:4227/148‑1 (MQ=255) tCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGt > 7:207179/1‑148 (MQ=40) gTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGTACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAg < 7:1263/149‑1 (MQ=38) gTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAg < 5:185513/149‑1 (MQ=38) gTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAg < 2:61916/149‑1 (MQ=38) ccAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTc < 7:102329/149‑1 (MQ=37) aaCGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGACCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCACGTACGCCCGGCAACCAAGGCGACCTGGTCAACGacac > 4:263213/1‑149 (MQ=11) ccTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAg > 8:210958/1‑138 (MQ=37) ccTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAg < 7:210958/138‑1 (MQ=37) cTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCGCACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATcac < 1:295805/149‑1 (MQ=255) tgtgATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAg > 5:197192/1‑149 (MQ=37) gtgATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCTCGTCGGTAACCG‑ACGTGc > 4:85546/1‑100 (MQ=255) gtgATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCTCGTCGGTAACCG‑ACGTGc < 3:85546/100‑1 (MQ=255) tCAAATCGATCGCAAGCGTTGAAGGTGCGGACGTCGGCAAGTTCGATCATCTGACGCTGGACAAGACGCCGGTCATCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGTCGACCTGGTCAAGGTCACCATAACAGCCGAc < 2:370726/149‑1 (MQ=11) tCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGAc > 6:253610/1‑149 (MQ=37) tCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGAc < 3:279560/149‑1 (MQ=37) aaaTCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCa < 6:299249/149‑1 (MQ=37) atcgatcgCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGa > 6:57934/1‑149 (MQ=37) atcgatcgCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGa < 5:143380/149‑1 (MQ=37) atcgCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGa < 1:223805/145‑1 (MQ=37) atcgCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGa > 2:223805/1‑145 (MQ=37) atcgCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTc > 2:373817/1‑149 (MQ=37) gTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGcc > 4:284151/1‑147 (MQ=37) ttGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGt < 7:70625/142‑1 (MQ=37) ttGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGt > 8:70625/1‑142 (MQ=37) ttGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGcc > 2:19452/1‑146 (MQ=37) ggTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGt > 7:328641/1‑149 (MQ=37) gTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGt > 4:39286/1‑148 (MQ=37) gCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCgag < 1:290197/141‑1 (MQ=37) gCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCgag > 2:290197/1‑141 (MQ=37) ggACGTCGGCAAGTTCGAGCAACTGCCGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAAc < 7:160467/149‑1 (MQ=37) ggCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCtt < 3:263213/149‑1 (MQ=37) gCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTc < 5:57934/149‑1 (MQ=37) cAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGAt < 8:308307/144‑1 (MQ=35) cAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGAt > 7:308307/1‑144 (MQ=35) aGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCAcc < 3:39286/149‑1 (MQ=38) ttCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGt < 6:197192/149‑1 (MQ=39) aGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCAc > 1:168026/1‑149 (MQ=39) gCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGCGCCCCATCACACCCGACCACACATCGGTGGCCGAGAACGTCAAACCGATCTTCACCGAGCACg > 5:276109/1‑149 (MQ=11) aaCTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCCCCGTGCACGt > 8:222523/1‑148 (MQ=255) cTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTaaa > 1:384940/1‑149 (MQ=255) cGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAg < 5:253610/149‑1 (MQ=255) tGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCg > 6:37895/1‑149 (MQ=255) aCAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTg < 1:373817/149‑1 (MQ=255) aGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCt > 4:316973/1‑149 (MQ=255) ccGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTNACGa < 5:37895/149‑1 (MQ=39) ggTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGAcc < 8:207179/149‑1 (MQ=39) gTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCt > 2:38238/1‑149 (MQ=39) gctcGTCGGTAACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCt < 7:284575/134‑1 (MQ=255) gctcGTCGGTAACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCt > 8:284575/4‑137 (MQ=255) cACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCg > 5:221170/1‑149 (MQ=39) cACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCg > 1:178793/1‑149 (MQ=39) gTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGa > 2:205788/1‑149 (MQ=39) ggTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGAcc < 2:168026/148‑1 (MQ=39) ttACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAACCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCt > 5:206718/1‑148 (MQ=255) | CCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCG‑ACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCT > NC_002947/205782‑206076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |