| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,584,899 | A→C | 7.8% | intergenic (+46/‑89) | benC → / → benD | benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,584,899 | 0 | A | C | 7.8% | 215.9 / 7.8 | 75 | intergenic (+46/‑89) | benC/benD | benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (35/34); new base C (4/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
CCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCAAG > NC_002947/3584757‑3585039 | cccGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGc > 7:190741/1‑149 (MQ=255)cccGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGc > 7:344012/1‑149 (MQ=255)cccGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGc > 2:238953/1‑149 (MQ=255) cGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTc < 8:234269/149‑1 (MQ=255) cGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTc < 8:214231/149‑1 (MQ=255) gCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTcc < 6:208101/149‑1 (MQ=255) gCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCATGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑TCGCCCGCTcc < 2:274527/149‑1 (MQ=255) cccATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCcaca < 3:142150/149‑1 (MQ=255) cccATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCcaca < 8:104709/149‑1 (MQ=255) tggAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATcg > 5:295158/1‑149 (MQ=255) aGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATcgcg > 2:202863/1‑147 (MQ=255) ggTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGcc > 7:48491/1‑149 (MQ=255) cAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCttt > 2:324557/1‑149 (MQ=255) aGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GCGCCCGCTCCCACAGTGATCGCGCAGCCTTTc < 1:340147/149‑1 (MQ=255) gCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCa < 3:165915/149‑1 (MQ=255) gtgcgtgAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt > 7:175174/1‑147 (MQ=255) gtgcgtgAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCttt > 6:319007/1‑147 (MQ=255) gtgcgtgAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGa < 7:11671/149‑1 (MQ=255) gtgcgtgAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGa < 8:210405/149‑1 (MQ=255) gtgcgtgAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGa < 2:384740/149‑1 (MQ=255) aGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCaa > 2:233815/1‑146 (MQ=255) ggCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑Ttg < 8:344012/149‑1 (MQ=255) gCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑Ttgc > 7:284975/1‑149 (MQ=255) cATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGT‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑Ttgct > 2:349303/1‑149 (MQ=255) aTTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑Ttgctg > 2:34609/1‑149 (MQ=255) aTTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑Ttgctg < 1:238953/149‑1 (MQ=255) cGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGT‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAgg < 1:349303/149‑1 (MQ=255) cGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAgg > 6:333685/1‑149 (MQ=255) ccAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGtc < 6:325820/149‑1 (MQ=255) cAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGtct > 4:84339/1‑149 (MQ=255) aCTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTGCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGtctct > 5:48155/1‑149 (MQ=255) cTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGtctctc < 5:319007/149‑1 (MQ=255) ctactaCGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTcgc < 8:284975/148‑1 (MQ=255) ctactaCGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTcgc > 4:282793/1‑148 (MQ=255) ctactaCGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGAGATCGCGCAGCCTATCAGGCTTTGAGCAAGAGAG‑TTGCTC‑GCACAGGGACTCTcgc > 4:282798/1‑148 (MQ=255) tactacGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACCGGGTCTCTcgcg > 7:141388/1‑148 (MQ=255) cGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTg > 6:265522/1‑148 (MQ=255) cGAGAAGTTTGCGGCTGCGGACTGACGATCCCTGAATCAAAGAAATACCCCCACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGAACGCGCAGCCTTTCAGGCATTGAGCAAGACAG‑TAGCTG‑CCACAGGCTATCTCGCGAAcag > 8:139481/1‑146 (MQ=255) gagaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAgg > 2:42743/1‑132 (MQ=255) gagaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAgg < 1:42743/132‑1 (MQ=255) agaAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAGTTTGCTG‑CCACAGGGTCTCTCGCGAACTGga < 1:34609/149‑1 (MQ=255) aaGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTGCCCACAGGGTCTCTCGCGAACTGgaga < 1:202863/149‑1 (MQ=255) tttGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTa > 7:312752/1‑149 (MQ=255) cggctgcggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACat < 1:61350/148‑1 (MQ=255) ggctgcggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACatat < 2:227963/149‑1 (MQ=255) ggcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaa > 6:269805/1‑149 (MQ=255) gcCTGACGCTCCCTGATTCAAAGCAATACGCCGGCCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaac < 1:380924/149‑1 (MQ=255) gcCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaac < 8:196602/149‑1 (MQ=255) ccTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaa > 5:302968/1‑147 (MQ=255) aCGCTCCCTGATTCAAAGCAATACGCCGACCCTGTTGGTGTCCCCCTGAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAacaaca < 1:324557/147‑1 (MQ=255) cGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTc > 1:206797/1‑149 (MQ=255) ccTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaa < 8:48491/147‑1 (MQ=255) cTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaagg > 1:322582/1‑148 (MQ=255) ttCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaaggcaagg < 6:48155/149‑1 (MQ=255) aaaGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTg > 7:347050/1‑149 (MQ=255) aaaGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTg > 7:21065/1‑149 (MQ=255) aaGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGc > 1:358056/1‑149 (MQ=255) gCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGccc < 6:295158/149‑1 (MQ=255) gCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaaggc > 6:388854/1‑132 (MQ=255) gCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCcaaggc < 5:388854/132‑1 (MQ=255) gCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTc < 2:225775/147‑1 (MQ=255) gCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTc > 1:225775/1‑147 (MQ=255) gCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCAc < 8:21065/149‑1 (MQ=255) gCCGACCCCGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGATCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaac < 3:329797/120‑1 (MQ=255) gCCGACCCCGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGaacaac > 4:329797/1‑120 (MQ=255) aCCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCTCAGTGATCGCGCAGCATTTCTGGCTTTTAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACTACTGATTCCAAGGCAAGGTTGCCCTGGTCACCGGt < 3:282798/149‑1 (MQ=255) aCCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGACAAGGTTGCCCTGGTCACCGGt < 3:282793/149‑1 (MQ=255) tgGGAG‑CGGGC‑TCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTgccgcc > 3:351233/1‑149 (MQ=255) tgGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGccc > 5:169118/1‑132 (MQ=255) tgGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGccc < 6:169118/132‑1 (MQ=255) ggAG‑CGGGC‑TCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGccc > 8:13519/1‑148 (MQ=255) gAG‑CGGGC‑TCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGccc > 2:50872/1‑147 (MQ=255) gAG‑CGGGC‑TCGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGccc > 2:45240/1‑147 (MQ=255) gAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGccc > 1:226846/1‑147 (MQ=255) aG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCAAg < 1:233815/149‑1 (MQ=255) | CCCGCCACCCATGGTGGAAGCGGTCAGCCAGTACGTGCGTGAGCAGGGCATTACCCCGGCCAACTTCTACTACGAGAAGTTTGCGGCTGCGGCCTGACGCTCCCTGATTCAAAGCAATACGCCGACCCTGTGGGAG‑CGGGC‑GAGCCCGCTCCCACAGTGATCGCGCAGCCTTTCAGGCTTTGAGCAAGAGAG‑TTGCTG‑CCACAGGGTCTCTCGCGAACTGGAGATTTACATATGAACAACAGATTCCAAGGCAAGGTTGCCCTGGTCACCGGTGCCGCCCAAG > NC_002947/3584757‑3585039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |