| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,761,701 | C→T | 8.0% | A350V (GCC→GTC) ‡ | PP_3325 → | ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,761,701 | 0 | C | T | 8.0% | 218.9 / 6.4 | 75 | A350V (GCC→GTC) ‡ | PP_3325 | ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base C (34/35); new base T (4/2); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
TGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATA > NC_002947/3761562‑3761845 | tGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCa > 4:77688/1‑149 (MQ=255) aGCTGCGCCTGGGCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACggg < 6:102191/149‑1 (MQ=255) gCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCACGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCCAGCTGCACggg > 5:89709/1‑148 (MQ=255) cTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCa < 6:91216/149‑1 (MQ=255) tGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAACTGCCCGTGCAGCTCggc > 4:103017/1‑147 (MQ=255) cAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTgg > 8:253235/1‑149 (MQ=255) cAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAACTGCCCGTGCAGCTCGGCCTgg < 3:103017/149‑1 (MQ=255) ccACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGtg > 6:256973/1‑149 (MQ=255) ccACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGAGAGCACCACCATCACGCGCTTCTATCGCGAACCCGACTTCGAATGGAACGACAACATCACCCACGCCGAGCTGCACGGGCACTGCGAGCTGGGtg > 4:83827/1‑149 (MQ=255) acCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCggcctg > 5:205704/1‑133 (MQ=38) acCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCggcctg < 6:205704/138‑6 (MQ=38) ccAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGc > 1:267778/1‑116 (MQ=255) ccAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGc < 2:267778/116‑1 (MQ=255) aGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCAt < 4:373105/149‑1 (MQ=255) gggCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTTCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCAt > 4:226885/1‑148 (MQ=255) ggCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCa < 3:190425/149‑1 (MQ=255) cACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGTATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGa > 1:56660/1‑149 (MQ=255) aCGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAc > 6:19188/1‑149 (MQ=255) gCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGAccc > 5:8781/1‑149 (MQ=255) tCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGAGACCGCGACTTCGAATGGAACGACAACATCACCAAGGCCGAGCGGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg > 7:160064/1‑149 (MQ=255) gggCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGGTGGCAGCATCAGACCCtggtgg > 4:332593/1‑149 (MQ=255) gCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTgggg < 4:102719/149‑1 (MQ=255) acagtgccGAGCCCCAGGCCCTGGTGAGCACCACCATCACGGGCTTCTATCGCGAACGCGACTTCGAATGGACCGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTg < 8:160064/143‑1 (MQ=255) aCAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg < 7:198670/140‑1 (MQ=255) aCAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCtg > 8:198670/1‑140 (MQ=255) aGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGa < 6:380474/149‑1 (MQ=255) aGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGa < 5:229406/149‑1 (MQ=255) cTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAg > 6:118454/1‑148 (MQ=255) cTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGt < 5:355056/149‑1 (MQ=255) tCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTa > 6:138167/1‑149 (MQ=255) cGAGCACCAGGCCATGGTGAGCACCACCATCACCCGCTTCTATCGCGAACGCGACTTCGAATGGAACTACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTAc < 8:174499/148‑1 (MQ=255) gAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGc > 8:98637/1‑97 (MQ=255) ccAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGAAGCATCAGACCCTGGTGGGGCTGGAGTACGaaaaa > 8:241568/1‑147 (MQ=255) ccAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCAGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAAc > 5:274731/1‑148 (MQ=255) aGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAc < 5:19188/149‑1 (MQ=255) aGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAc < 4:195563/149‑1 (MQ=255) gCCCTGGTGAGCACCACCATCACGCGCTTCTATCTCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑Cg < 8:12556/149‑1 (MQ=255) gCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑Cg > 7:77327/1‑149 (MQ=255) ccTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGc > 3:221120/1‑148 (MQ=255) aGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCa < 6:31837/149‑1 (MQ=255) caccaTCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAg > 5:144673/1‑148 (MQ=255) accaTCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTa < 6:274731/149‑1 (MQ=255) caTCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCa < 3:322312/99‑1 (MQ=255) caTCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCa > 4:322312/1‑99 (MQ=255) aCGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGc > 5:313868/1‑148 (MQ=255) gcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGGTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAgc < 3:332593/149‑1 (MQ=255) gcTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAgc < 1:155119/149‑1 (MQ=255) cTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAgcg < 5:256973/149‑1 (MQ=255) cTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAgcgc < 6:8781/147‑1 (MQ=255) tCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCAc < 6:805/147‑1 (MQ=255) tCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGt > 5:8928/1‑149 (MQ=255) cgAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCg > 7:302088/1‑149 (MQ=255) aaCGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCa < 6:144673/149‑1 (MQ=255) aaCGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCa < 5:118454/149‑1 (MQ=255) ttCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATgg > 2:356908/1‑149 (MQ=255) cGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATggg < 5:138167/148‑1 (MQ=255) gAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTACACGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGc < 1:286455/149‑1 (MQ=255) aTGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTgg < 8:77327/149‑1 (MQ=255) tGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGa < 6:89709/149‑1 (MQ=255) gAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTg > 2:311212/1‑145 (MQ=255) gAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGat < 3:77688/148‑1 (MQ=255) aaCGACAACATCACCCAGGCCGAGCTTCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGatat < 3:83827/149‑1 (MQ=255) aCGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATc < 1:28611/149‑1 (MQ=255) gACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTa > 1:144518/1‑149 (MQ=255) cagccACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAAc > 2:102765/5‑149 (MQ=37) gccACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAAccc > 3:115254/3‑149 (MQ=38) tCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCg < 1:33945/149‑1 (MQ=255) tCACCCAGCTCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATgg < 3:287120/130‑1 (MQ=255) tCACCCAGCTCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATgg > 4:287120/1‑130 (MQ=255) cccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 5:252352/1‑149 (MQ=255) cccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 6:156068/1‑149 (MQ=255) ccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTAccc > 7:343958/1‑99 (MQ=255) ccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTAccc < 8:343958/99‑1 (MQ=255) ccAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGta > 8:73579/1‑148 (MQ=255) cAGGCCGAGCTGCACGGGCAGTTAGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCGGGAGGACGAAAACTAC‑CGCACCAGCAAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGTCTGGATATATACAACACGGtata > 7:356276/1‑149 (MQ=255) | TGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGGCTGGCAGCATCAGACCCTGGTGGGGCTGGAGTACGAAAACTAC‑CGCAACAGCCAGAAGTACCCGCAAAGCGCCACGTCCGCAGCGTATGGGCTGGATATCTACAACCCGGTATA > NC_002947/3761562‑3761845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |