Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,804,019	T→C	7.9%	intergenic (‑103/‑41)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,804,019	0	T	C	7.9%	174.5 / 5.0	63	intergenic (‑103/‑41)	PP_3361/PP_3362	aminotransferase/AsnC family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (22/36);  new base C (2/3);  total (24/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01

ATCGCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGC  >  NC_002947/3803872‑3804166                                                                                                                                                     |                                                                                                                                                    aTCGCTTGCCGAAAACCGATGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTTCATACGGTCGGGCGCAACAGGCATTATGCCGGTTc                                                                                                                                                    <  1:351442/149‑1 (MQ=255)        gCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCTGACCgg                                                                                                                                             >  5:323787/1‑149 (MQ=255)        gCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCg                                                                                                                                              <  3:327009/148‑1 (MQ=255)         ccGAAAGCCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCCTGAGCGCGCGGATTGTTTTTCAATAGCTTGTCTTGCGCCGCCGAAAGGGACCCCCTGCATAGGGTCGGGCGCAACAGCCATTATGCCGGTTCCGCCCgg                                                                                                                                             >  1:290435/1‑149 (MQ=255)         ccGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCgg                                                                                                                                             >  3:117405/1‑148 (MQ=255)         ccGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGc                                                                                                                                            <  1:149772/149‑1 (MQ=255)           gAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTCGGAACCGGCAt                                                                                                                                          <  2:388556/149‑1 (MQ=255)             aaaCCGAGGTGCCGTGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGGTTGTCATGCGCCGCCGAAACGGACACCCTGCATTCGGTCGGGCGCAACAGGCATTATGCCGGTCGGAACCGGCATa                                                                                                                                         <  6:6642/148‑1 (MQ=255)               aCCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTCGGAACCGGCATAATg                                                                                                                                      <  4:159488/149‑1 (MQ=255)                 cGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGAc                                                                                                                                    >  2:159147/1‑149 (MQ=255)                  gAGGTGCCGGGTGGGAAAGGGCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACg                                                                                                                                   <  4:127467/149‑1 (MQ=255)                       gCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAg                                                                                                                              <  6:106146/149‑1 (MQ=255)                       gCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAg                                                                                                                              <  2:9406/149‑1 (MQ=255)                                  aaGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAgg                                                                                                                    <  8:195347/148‑1 (MQ=255)                                            atatCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGc                                                                                                         >  1:103317/1‑149 (MQ=255)                                               tcatcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCTGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt                                                                                                       <  6:323787/148‑1 (MQ=255)                                               tcatcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt                                                                                                       <  2:220240/148‑1 (MQ=255)                                                catcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt                                                                                                       >  5:21437/1‑147 (MQ=255)                                                catcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGt                                                                                                       <  6:21437/147‑1 (MQ=255)                                                 atcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGa                                                                                                     <  6:34738/148‑1 (MQ=255)                                                 atcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGa                                                                                                     >  5:34738/1‑148 (MQ=255)                                                  tcaGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTACAATGCGTGAcc                                                                                                   >  7:132067/1‑149 (MQ=255)                                                    aGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTg                                                                                                 >  2:20291/1‑149 (MQ=255)                                                    aGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTg                                                                                                 <  1:171625/149‑1 (MQ=255)                                                    aGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTg                                                                                                 <  1:165893/149‑1 (MQ=255)                                                      gTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGa                                                                                               <  1:370649/149‑1 (MQ=255)                                                                 cgcTGATTGTTTTTCAATAGCTTGTCATGCCCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTa                                                                                          >  1:33933/1‑144 (MQ=255)                                                                  gcTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATc                                                                                    <  2:103317/149‑1 (MQ=255)                                                                      aTTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATcgc                                                                                  <  8:147246/147‑1 (MQ=255)                                                                      aTTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGATGCAATGCGTGACCTGGACGCTAAAGATcgcg                                                                                 <  6:312208/148‑1 (MQ=255)                                                                               cAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTg                                                                        <  1:97377/148‑1 (MQ=255)                                                                                aaTAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATaa                                                                                                                                        >  7:162460/1‑83 (MQ=255)                                                                                aaTAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATaa                                                                                                                                        <  8:162460/83‑1 (MQ=255)                                                                                aaTAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAg                                                                      >  5:104559/1‑149 (MQ=255)                                                                                    gCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTAc                                                                  <  8:182025/149‑1 (MQ=255)                                                                                     cTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACt                                                                 >  1:344917/1‑149 (MQ=255)                                                                                         tCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGAATTATGCCGGTTCCGACCGGGATAATGACGGCAAGCTTATCTAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTc                                                              <  8:226269/148‑1 (MQ=255)                                                                                           aTGCGCCGCCGAAACGGACACCCTGCATACGTTCGGGCGCAACAGTCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGTTAAAGATCGCGAGATTCTTGAGGTACTTTCGaa                                                           <  1:249682/149‑1 (MQ=255)                                                                                                 cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGAcgc                                                     >  4:381191/1‑149 (MQ=255)                                                                                                 cgccgAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGAcgc                                                     <  7:79052/149‑1 (MQ=255)                                                                                                   ccgAAAAGGAGACCCTGCATACGGTCGGGCGCAACATGCATTATGCCGGTTCCGACCGGGATATTGACGGCAAGCTTATCTAGGGGCTGGAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGAcgcgc                                                   <  4:237616/149‑1 (MQ=255)                                                                                                              acCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTc                                        <  2:290435/149‑1 (MQ=255)                                                                                                                   gCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTAtt                                              >  4:113588/1‑138 (MQ=255)                                                                                                                   gCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTAtt                                              <  3:113588/138‑1 (MQ=255)                                                                                                                      tACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGtt                                >  2:222948/1‑149 (MQ=255)                                                                                                                       aCGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGt                                 >  8:48455/1‑147 (MQ=255)                                                                                                                        cGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTa                               <  4:117405/148‑1 (MQ=255)                                                                                                                        cGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAg                              <  6:227725/149‑1 (MQ=255)                                                                                                                         ggTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAgc                             >  5:370723/1‑149 (MQ=255)                                                                                                                           tCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAgccg                           >  5:219692/1‑149 (MQ=255)                                                                                                                                   aaCAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCa                     >  5:153946/1‑147 (MQ=255)                                                                                                                                   aaCAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATa                   <  1:20291/149‑1 (MQ=255)                                                                                                                                     cAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCATGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGGGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAgg                 <  8:184405/149‑1 (MQ=255)                                                                                                                                     cAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAgg                 <  1:159147/149‑1 (MQ=255)                                                                                                                                     cAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGC‑TATCAAGGGGCTTCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGc                <  2:102391/149‑1 (MQ=255)                                                                                                                                     cAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGC‑TATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATTGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGc                <  4:72889/149‑1 (MQ=255)                                                                                                                                        tcATTATGCCGGTCGGAACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCt              >  6:261362/2‑149 (MQ=255)                                                                                                                                        tcATTATGCCGGTCGGAACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGAGTGACCTGTACGCTAAATATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCt              >  8:284470/2‑149 (MQ=255)                                                                                                                                           ttATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTc           <  6:219692/149‑1 (MQ=255)                                                                                                                                            tATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTcc          >  2:274583/1‑149 (MQ=255)                                                                                                                                                 cGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTgcg                                           >  1:132647/1‑111 (MQ=255)                                                                                                                                                 cGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTgcg                                           <  2:132647/111‑1 (MQ=255)                                                                                                                                                  ggTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGt    <  2:33933/149‑1 (MQ=255)                                                                                                                                                    ttCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTACAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGc  <  8:132067/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ATCGCTTGCCGAAAACCGAGGTGCCGGGTGGGAAAGGTCTGTCATATCATCAGGTTCC‑GAGCGCGCTGATTGTTTTTCAATAGCTTGTCATGCGCCGCCGAAACGGACACCCTGCATACGGTCGGGCGCAACAGGCATTATGCCGGTTCCGACCGGCATAATGACGGCAAGCTTATCAAGGGGCTGCAATGCGTGACCTGGACGCTAAAGATCGCGAGATTCTTGAGGTACTTTCGAAGGACGCGCGTATTGCGCTCAAGGCGTTAGCCGGCCGCATAGGCCTTTCCCGAAGTGC  >  NC_002947/3803872‑3804166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑