| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,059,023 | G→C | 6.2% | P54A (CCG→GCG) | fecI ← | RNA polymerase sigma 19 factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,059,023 | 0 | G | C | 6.2% | 249.2 / 4.3 | 77 | P54A (CCG→GCG) | fecI | RNA polymerase sigma 19 factor |
| Reads supporting (aligned to +/- strand): ref base G (39/33); new base C (3/2); total (42/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGCGACGGCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCG > NC_002947/4058880‑4059166 | tGGCGACGGCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTggg > 2:263802/1‑149 (MQ=255) gCGACGGCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGgcg > 5:392451/1‑149 (MQ=255) aCGGCACGTGTTACTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTg < 6:76083/149‑1 (MQ=255) ggCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTGGCGTATGTCTGCCAGCGGCTGGGCGCTGGc < 1:32225/149‑1 (MQ=255) gCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCTGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGcc < 1:213083/149‑1 (MQ=255) gtgtTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGCCCAGCCGCTGGc < 4:196141/144‑1 (MQ=255) gtgtTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGCCCAGCCGCTGGc > 3:196141/1‑144 (MQ=255) gtgtTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCACCGCCTGGGCGCTGGCCAGaa > 7:145117/1‑149 (MQ=255) tgtTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAAt < 6:348160/149‑1 (MQ=255) tgtTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAAt < 7:52671/149‑1 (MQ=255) ttGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATgc < 1:162812/149‑1 (MQ=255) cTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATgcgc < 1:127807/148‑1 (MQ=255) cTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCa < 6:392451/149‑1 (MQ=255) cTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGCAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATgcgc < 1:281796/148‑1 (MQ=255) cGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAg > 5:26191/1‑148 (MQ=255) gggCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGa > 4:19103/1‑148 (MQ=255) gCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGaaaa < 3:194611/149‑1 (MQ=255) gCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGaaaa < 3:349062/149‑1 (MQ=255) gCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGaa > 5:17239/1‑147 (MQ=255) aaCTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGt < 5:37037/149‑1 (MQ=255) gcgcCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATcc > 5:85208/1‑149 (MQ=255) cgcCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATcc < 6:358622/148‑1 (MQ=255) ccAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTgg < 3:380122/149‑1 (MQ=255) aCGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGCCCAGCCGCTGGc > 7:336431/1‑121 (MQ=255) aCGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGCCCAGCCGCTGGc < 8:336431/121‑1 (MQ=255) aTCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGt > 3:109518/1‑149 (MQ=255) aTCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGt > 8:294666/1‑149 (MQ=255) aaGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTcgg < 6:17239/149‑1 (MQ=255) aGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTcggc > 4:66727/1‑149 (MQ=255) ggTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTcggcg < 6:26191/149‑1 (MQ=255) ggTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTcggcg > 8:2162/1‑149 (MQ=255) ggCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCAt < 5:204976/149‑1 (MQ=255) cTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATTCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATccc < 1:263802/149‑1 (MQ=255) cTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATcc > 4:131709/1‑148 (MQ=255) cTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAgg > 5:326268/1‑149 (MQ=255) tCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAgg > 4:321890/1‑148 (MQ=255) tACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGcc > 5:243047/1‑148 (MQ=255) tggtggAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCg > 8:359062/1‑149 (MQ=255) gtggAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGgc > 4:147258/1‑149 (MQ=255) tggAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGgcg > 6:274054/1‑149 (MQ=255) gTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGcc > 8:124089/1‑149 (MQ=255) gTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGcc < 3:344678/149‑1 (MQ=255) gCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAgg > 6:47134/1‑149 (MQ=255) cTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGc < 7:359062/149‑1 (MQ=255) cTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGc > 4:132950/1‑149 (MQ=255) tGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCt > 8:276131/1‑149 (MQ=255) tGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATATCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCt > 1:286210/1‑149 (MQ=255) tGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGAACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCt > 3:375425/1‑149 (MQ=255) cAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCaa > 5:245144/1‑149 (MQ=255) aaCGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAagc < 5:274054/149‑1 (MQ=255) ccACAGTCAGCAGGTAGGTACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGa > 6:223440/1‑149 (MQ=255) ccACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGa > 6:277407/1‑149 (MQ=255) cacaGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGAt > 6:277102/1‑149 (MQ=255) cacaGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGAt > 6:74775/1‑149 (MQ=255) acaGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATg > 7:98819/1‑149 (MQ=255) agcagGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTccc < 5:277407/148‑1 (MQ=255) gcagGTAGGCACGCGGTTCGCGTATGTCTGCCTGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTccctg < 8:145117/149‑3 (MQ=255) gTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTa > 8:338412/1‑147 (MQ=255) tAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCACAGGCATTGCCCATACGCCGGAGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAg > 4:146923/1‑149 (MQ=255) ggCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAgg < 3:321890/148‑1 (MQ=255) cACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAggg > 8:47782/1‑147 (MQ=255) aCGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATcc > 2:274664/1‑82 (MQ=255) aCGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATcc < 1:274664/82‑1 (MQ=255) cgcgGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGggcagg < 7:47782/149‑1 (MQ=255) gcgGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGggcaggc < 7:294666/149‑1 (MQ=255) ggTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGgcaggcag < 5:223440/149‑1 (MQ=255) gcgTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGcaggccag > 8:21870/1‑149 (MQ=255) tATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCt < 5:47134/149‑1 (MQ=255) tGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTg > 1:366666/1‑149 (MQ=255) tGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTg > 4:354039/1‑149 (MQ=255) gCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCgg < 7:177580/84‑1 (MQ=255) gCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCgg > 8:177580/1‑84 (MQ=255) gCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTgg > 2:19556/1‑149 (MQ=255) ccAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGt < 8:127676/146‑1 (MQ=255) ccAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGt > 7:127676/1‑146 (MQ=255) ccAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGt < 7:124089/146‑1 (MQ=255) cAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTggcg < 3:66727/149‑1 (MQ=255) | TGGCGACGGCACGTGTTGCTCGGGCAACTGCGCCAACGCATCAAGGTAGGCCTGCTCCAGGCTACGTCGCTGGTGGAAGTTGCTGAGCAAACGCTTGCCCACAGTCAGCAGGTAGGCACGCGGTTCGCGTATGTCTGCCAGCGGCTGGGCGCTGGCCAGAATGCGCAGAAAAGTATCCTGGCTGAGGTCGGCGGCATCCCAGGCATTGCCCATACGCCGGCGCAGCCAGGCTTCAAGCCAGCCGCGATGCTCCCGGTACAGGGCAGGCAGGCCAGGCTCCGGTGGCG > NC_002947/4058880‑4059166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |