| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,415,037 | G→A | 5.5% | intergenic (+146/+22) | PP_5644 → / ← PP_3899 | membrane protein/hicB family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,415,037 | 0 | G | A | 5.5% | 271.1 / 2.9 | 89 | intergenic (+146/+22) | PP_5644/PP_3899 | membrane protein/hicB family protein |
| Reads supporting (aligned to +/- strand): ref base G (42/42); new base A (3/2); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01 | |||||||||||
TAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGAAC > NC_002947/4414889‑4415182 | tAGATGGCTAAGAAGCACACCTCTTCAAGCCCCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCACCCCTGCACAGTGAAGGATCATCCGCTTCCCTACGTTAGCCAGCATTGCAg > 8:236703/1‑149 (MQ=255) gATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTg > 7:289857/1‑149 (MQ=255) gATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTg > 3:364060/1‑149 (MQ=255) cTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGc < 5:223169/149‑1 (MQ=255) tATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCt > 5:393848/1‑149 (MQ=255) tGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGCta < 2:58221/148‑2 (MQ=255) aaGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCtttt < 8:52002/148‑1 (MQ=255) aCTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTg < 1:282943/149‑1 (MQ=255) ctcctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTgg < 5:234804/149‑1 (MQ=255) tcctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTggg > 5:315006/1‑149 (MQ=255) cctcTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggc > 1:61571/1‑149 (MQ=255) ctctTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTggg < 8:296124/147‑1 (MQ=255) ctctTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTACCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggcg > 7:329394/1‑149 (MQ=255) ctctTGAAGCCGCCATCAAGTGATCCCACAGGCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggcg < 8:164915/149‑1 (MQ=255) aGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTAcgc > 2:211719/1‑149 (MQ=255) gccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtga < 4:364060/149‑1 (MQ=255) gccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtga > 7:126177/1‑149 (MQ=255) ccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtgat > 5:93696/1‑149 (MQ=255) aTCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCAGGATGCATTCACGCTTTTTTCACGCCCTCCCCTGCAGAGTGAAGGCTCATCCGCTTCCCTACGTATGCCCGCTTTGCAGTGCGGGCTTTTGTTTGGGCGGCTACGCGtgatga < 7:236703/149‑1 (MQ=255) aTCAAGTGATCCCACAGTCCAGCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGGTCATCCGCTTACCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGttatga < 5:132135/149‑1 (MQ=255) cAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGAcc > 3:170343/1‑149 (MQ=255) gTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAg > 7:281523/1‑149 (MQ=255) gTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAg < 6:315006/149‑1 (MQ=255) tGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAgg > 1:375145/1‑149 (MQ=255) gATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTACCCAGCACAGAGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCTGCTACGCGTGATGACCCAgg > 5:266142/1‑148 (MQ=255) ccACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGCCCCAGGTACt > 8:68160/1‑148 (MQ=255) ccACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACt > 5:375612/1‑148 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCa < 8:99792/149‑1 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCa > 6:9786/1‑149 (MQ=255) acaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGCCCCAGGTACTCAc > 6:115603/1‑149 (MQ=255) gTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTaa < 6:375612/149‑1 (MQ=255) ccGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAgc > 3:70664/1‑149 (MQ=255) cGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCGTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAgcg > 2:146180/1‑149 (MQ=255) gCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAgcgc > 6:132461/1‑149 (MQ=255) ccTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCt > 6:326878/1‑149 (MQ=255) tCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCttt > 1:241520/1‑149 (MQ=255) ggcggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCttt < 8:289857/147‑1 (MQ=255) ggcggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGc < 6:103176/149‑1 (MQ=255) cggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCgt < 5:326878/149‑1 (MQ=255) ccATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCa > 3:9126/1‑149 (MQ=255) aTGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCAtt < 2:91783/149‑1 (MQ=255) cATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCaa < 8:126177/149‑1 (MQ=255) cATTCACGCGTTTATCACCCCCTCCCCTGCACAGGGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGTGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCaa < 8:329394/149‑1 (MQ=255) aTTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAg > 8:86075/1‑149 (MQ=255) aTTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAg > 4:50005/1‑149 (MQ=255) aTTAACGCTTTTTTCACGCCCTCCCCTGCACAGTGAACGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAg > 8:224198/1‑149 (MQ=255) cACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGa < 5:9786/148‑1 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGTGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGaaa > 6:243868/1‑149 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGaaa > 6:162621/1‑149 (MQ=255) cGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAAt < 1:211719/149‑1 (MQ=255) gCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTAcgc > 8:84926/1‑94 (MQ=255) gCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATa > 5:309199/1‑149 (MQ=255) cTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATAc > 2:2083/1‑149 (MQ=255) tCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGc < 2:241520/148‑1 (MQ=255) tCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGc < 4:62598/148‑1 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggt < 1:146180/149‑1 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggt > 7:50135/1‑149 (MQ=255) cccTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggtg < 4:265946/149‑1 (MQ=255) ccTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggtgg < 1:350303/149‑1 (MQ=255) tCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCt > 6:237327/1‑149 (MQ=255) cccTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCt < 8:281523/147‑1 (MQ=255) cccTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGc < 2:61571/149‑1 (MQ=255) aGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTgg < 7:224198/149‑1 (MQ=255) gTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGc < 7:86075/149‑1 (MQ=255) aaGGCTCATCCGCTTCCCTACGTTAGCCCTCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCg < 4:220100/148‑1 (MQ=255) ggCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTAGTGACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTa < 3:303556/149‑1 (MQ=255) ggCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTa < 3:308769/149‑1 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGt < 6:309199/147‑1 (MQ=255) gCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGt > 2:37992/1‑149 (MQ=255) gCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGt > 2:286037/1‑149 (MQ=255) cccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGt < 3:121378/148‑1 (MQ=255) ccTACGTTAGCCCGGATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGc < 6:393848/149‑1 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGTGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGc < 5:243868/149‑1 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTg < 3:211107/148‑1 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGc > 5:326719/1‑149 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGc < 7:68160/149‑1 (MQ=255) cTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGcc < 5:115603/149‑1 (MQ=255) cTACGTTAGCCCGCATTGCAGTGCGGGCTTATCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGcc > 1:34782/1‑149 (MQ=255) aaagaaaaGCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGcc > 7:125580/8‑149 (MQ=255) aaaGCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTAcc > 6:34292/3‑149 (MQ=255) gCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCt > 3:255094/1‑148 (MQ=255) cccGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGt > 3:290397/1‑137 (MQ=255) cccGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGt < 4:290397/137‑1 (MQ=255) cccGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTca > 6:244826/1‑149 (MQ=255) cctctgtGCAGTGCGGGCGTTGCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTACGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTcac < 6:266142/143‑1 (MQ=255) gCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAt > 1:363990/1‑149 (MQ=255) aTTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTg < 5:132461/149‑1 (MQ=255) tGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTAAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGaa > 1:72870/1‑149 (MQ=255) gCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGaa < 5:237327/148‑1 (MQ=255) cAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGAAc > 6:33895/1‑148 (MQ=255) | TAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACATTGAAC > NC_002947/4414889‑4415182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |