New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 967850 = | 21 (0.690) | 4 (0.150) | 4/260 | 3.2 | 16.1% | intergenic (‑29/+139) | PP_0830/PP_0831 | acetyltransferase/hypothetical protein |
? | NC_002947 | 967941 = | 23 (0.850) | intergenic (‑120/+48) | PP_0830/PP_0831 | acetyltransferase/hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GCGGTGGCCGCCAAACCGTGAATCGGGGCGCGGTGTTGGATGGAAAGCGGCCTATGATGTGAGGCTGATGGCCTCTTCGCGGGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/968009‑967850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagaggccATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGCGCCAGCAGGTACTGATAGCGTCGCCATTCCT > NC_002947/967941‑968086 GCGGTGGCCGCCAAACCGTGAATCGGGGCGCGGTGTTGGATGGAAAGCGGCCTATGATGTGAGCCTGATGGCCTCTTCGCGGGTAAACCCGCTACAGGGCCTGCACAGCAGTTGCGCCTGGAGCAGTCCCTGTGGGGGCAGGTTCACC > 5:115105/1‑148 CCGCCAAACCGTGAATCGGGGCGCGGTGTTGGATGGAAAGCGGCCTATGATGTGAGGCTGATGGCCTCTTCGCGGGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAA < 8:60497/147‑1 CGCCAAACCGAGAATCGGGGCGCGGGGGTGGATGGAAAGCTGCCTATGATGTGAGGCTGATGGCCTCTTCGCGGCTAACCCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGA < 7:68039/148‑1 TTCGCGGGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCCATCATCCTCACATCATAGTCCGCGTTCCATCCACAACCGCGCCCCGATTCACGGTTTGGCGG > 6:110584/1‑147 CGGGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACC > 6:84230/1‑148 GGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCG > 7:43228/1‑147 ACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGC < 5:84230/148‑1 CCGCGAAGAGGCCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGCGCCAGCAGGTACTGATAGCG > 6:33901/1‑148 CCGCGAAGAGGCCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGCGCCAGCAGGTACTGATAGCG > 6:82242/1‑148 CCATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGCGCCAGCAGGTACTGATAGCGTCGCCATTCCT > 6:121094/1‑148 GCGGTGGCCGCCAAACCGTGAATCGGGGCGCGGTGTTGGATGGAAAGCGGCCTATGATGTGAGGCTGATGGCCTCTTCGCGGGTAAACCCGCTACAGGGCCTGCACAGGATTTGAGCCTTGTGCAGTACCTGTGGGGGCGGGTTCACCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/968009‑967850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagaggccATCAGCCTCACATCATAGGCCGCTTTCCATCCAACACCGCGCCCCGATTCACGGTTTGGCGGCCACCGCCACGTAGCCTTTGACCGCAGCCGGTGCCTTGGGCTTGGCCTTGTGCGCCAGCAGGTACTGATAGCGTCGCCATTCCT > NC_002947/967941‑968086 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |