New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	240111 =	26 (0.860)	5 (0.170)	5/276	3.0	15.9%	coding (406/1128 nt)	PP_0188	uroporphyrin‑III C‑methyltransferase
	?	NC_002947	240158 =	28 (0.970)					coding (453/1128 nt)	PP_0188	uroporphyrin‑III C‑methyltransferase
Rejected: Frequency below/above cutoff threshold.

GCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACA  >  NC_002947/240011‑240303                                                                                                                                                    |                                                                                                                                                  ggcacccgggtcgctctgctcgcgcaggatctcgtcggcgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCggctg                                                                                                                                                   >  3:137636‑M1/101‑148 (MQ=255)   cAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCggctg                                                                                                                                                   <  2:50208/146‑1 (MQ=255)    acccgggtcgctctgctcgcgcaggatctcgtcggcgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCggctggct                                                                                                                                                <  1:47668‑M1/51‑1 (MQ=255)     cccgggtcgctctgctcgcgcaggatctcgtcggcgccttcgaccagggctttggcactggtgatgtcctgcaacgccgaaaggcgcagggtagccAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTa                                                                                                                                               >  2:47668‑M1/97‑148 (MQ=255)         ccAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGACGCCGAGCACCTCCTGCGGCTGGCTACCCt                                                                                                                                           >  5:89791/1‑148 (MQ=255)           aGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTgc                                                                                                                                         <  5:89500/148‑1 (MQ=255)           aGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTgc                                                                                                                                         <  6:164960/148‑1 (MQ=255)                   agaagaCCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCg                                                                                                                                 >  6:69162/1‑148 (MQ=255)                    gaagaCCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCgg                                                                                                                                >  4:82498/1‑148 (MQ=255)                     aagaCCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGc                                                                                                                               >  7:105877/1‑148 (MQ=255)                           gccgGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCa                                                                                                                         <  8:50508/148‑1 (MQ=255)                             cgGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAgg                                                                                                                       <  6:52941/148‑1 (MQ=255)                                       tAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAg                                                                                                             >  6:52244/1‑148 (MQ=255)                                       tAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAg                                                                                                             >  5:37364/1‑148 (MQ=255)                                        aGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGt                                                                                                            <  3:129087/148‑1 (MQ=255)                                        aGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGt                                                                                                            <  7:149035/148‑1 (MQ=255)                                            cAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGcc                                                                                                         >  3:48604/1‑147 (MQ=255)                                                  cAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCCCCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAACGccc                                                                                                  >  1:88150/1‑148 (MQ=255)                                                       cGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTc                                                                                             <  6:108411/148‑1 (MQ=255)                                                                            gcgcCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTg                                                                        >  1:10155/1‑148 (MQ=255)                                                                                 tGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGa                                                                   >  6:31986/1‑148 (MQ=255)                                                                                   gAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGa                                                                   >  5:91356/1‑146 (MQ=255)                                                                                               ggAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCgg                                                     >  7:3178/1‑148 (MQ=255)                                                                                                tagccagccgcaggaggtgctcggcttcggccaggcgccactctttgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCggg                                                    >  2:47668‑M2/53‑148 (MQ=255)                                                                                                 agccagccgcaggaggtgctcggcttcggccaggcgccactctttgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGt                                                   <  1:47668‑M2/97‑1 (MQ=255)                                                                                                    cagccgcaggaggtgctcggcttcggccaggcgccactctttgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGcc                                                >  3:137636‑M2/49‑148 (MQ=255)                                                                                                     agccgcaggaggtgctcggcttcggccaggcgccactctttgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCt                                               >  6:56295‑M2/48‑148 (MQ=255)                                                                                                      gccgcaggaggtgctcggcttcggccaggcgccactctttgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCtt                                              >  3:73875‑M2/47‑148 (MQ=255)                                                                                                                  ggCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGa                                  <  1:37526/148‑1 (MQ=255)                                                                                                                        tGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACt                            <  6:37364/148‑1 (MQ=255)                                                                                                                           ccGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCTCCGACGAGATCCTGCGCTAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTg                           <  5:127824/146‑1 (MQ=255)                                                                                                                            cGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGcc                        >  8:80536/1‑148 (MQ=255)                                                                                                                            cGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGcc                        >  4:85752/1‑148 (MQ=255)                                                                                                                                     gCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTg               <  6:91356/148‑1 (MQ=255)                                                                                                                                         ctcctGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCa           >  5:135013/1‑148 (MQ=255)                                                                                                                                          tcctGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCAc          >  1:10245/1‑148 (MQ=255)                                                                                                                                             tgcggctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGc        >  5:35506‑M2/8‑147 (MQ=255)                                                                                                                                                  ctGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACa  <  5:52244‑M2/146‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGGAAACCGTGCTGGGAGAAAGCCGCAAAGAGTGGCGCCTGGCCGAAGCCGAGCACCTCCTGCGGCTGGCTACCCTGCGCCTTTCGGCGTTGCAGGACATCACCAGTGCCAAAGCCCTGGTCGAAGGCGCCGACGAGATCCTGCGCGAGCAGAGCGACCCGGGTGCCTTCGCCGCCCGCGAGCAACTGGCCCGCAGCCTGGCCACGCTCAACA  >  NC_002947/240011‑240303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.