New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5545321 =NA (NA)37 (1.240) 29/286 0.2 97.4% intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NC_002947 = 5621245 1 (0.030)coding (19/774 nt) PP_4939 hypothetical protein

CACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCC  >  NC_002947/5621099‑5621392
                                                                                                                                                  |                                                                                                                                                   
attgggaaccatagccaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagagctgacgtcatgcgcatcctgtttgcggtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    <  8:69313‑M2/3‑1 (MQ=255)
attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    <  4:95368‑M2/3‑1 (MQ=255)
attgggaaccatagcaaagtagtcggcggctgacctacccggatcaggcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                    <  8:149822‑M2/3‑1 (MQ=255)
 ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct                                                                                                                                                   <  4:154791‑M2/4‑1 (MQ=255)
  tgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                                  <  8:96651‑M2/5‑1 (MQ=255)
    ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 <  7:129890‑M2/6‑1 (MQ=255)
    ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                 >  6:84018‑M2/142‑147 (MQ=255)
     gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                <  7:67300‑M2/7‑1 (MQ=255)
     gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                <  5:107027‑M2/7‑1 (MQ=255)
         catagcaaagtattcggcggctgccctacccggatcagtcggcgaatccttttctacatctcgatgtcagtgcagatctgccgtcatgcgcatcctctttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGa                                                                                                                                            >  1:148021‑M2/137‑147 (MQ=255)
             acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTTTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaaca                                                                                                                                          <  6:127374‑M2/145‑12 (MQ=255)
             acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaaca                                                                                                                                          <  7:111631‑M2/145‑12 (MQ=255)
              caaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAgc                                                                                                                                       >  7:95323‑M2/132‑147 (MQ=255)
                aagtattcggcggctgacctacccggatcagtcgtcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCa                                                                                                                                    <  2:52311‑M2/19‑1 (MQ=255)
                   tcgtcgCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataac                                                                                                                                 <  8:110014‑M2/148‑21 (MQ=255)
                    attcggcggctgacctacccggataagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgatgtgcgacagagcagacaggaaggtctgtgtgatCTCTCATTTGAAAAGCGAACCgg                                                                                                                                >  8:90612‑M2/126‑148 (MQ=255)
                             ctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTcc                                                                                                                       <  2:30571‑M2/32‑1 (MQ=255)
                              tgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTcc                                                                                                                       >  2:32664‑M2/116‑147 (MQ=255)
                               tCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttcttt                                                                                                                     >  8:50861‑M2/1‑116 (MQ=255)
                                    ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttcta                                                                                                                  >  8:40983‑M2/1‑111 (MQ=255)
                                    ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttcta                                                                                                                  >  3:42802‑M2/1‑111 (MQ=255)
                                    ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttcta                                                                                                                  >  8:80483‑M2/1‑111 (MQ=255)
                                    acccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTAc                                                                                                                >  5:96524‑M2/110‑148 (MQ=255)
                                      ccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGa                                                                                                              >  3:82949‑M2/108‑148 (MQ=255)
                                         gatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTa                                                                                                           <  3:127889‑M2/44‑1 (MQ=255)
                                          gaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaa                                                                                                          >  2:2628‑M2/1‑105 (MQ=255)
                                                cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaacacagg                                                                                                    <  4:123407‑M2/148‑50 (MQ=255)
                                                cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacag                                                                                                     >  6:102453‑M2/1‑99 (MQ=255)
                                                 tCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggc                                                                                                   <  8:15167‑M2/148‑51 (MQ=255)
                                                  gcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCtt                                                                                                   >  2:117532‑M2/96‑147 (MQ=255)
                                                    gaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTca                                                                                                 >  6:96488‑M2/94‑147 (MQ=255)
                                                    gaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTca                                                                                                 >  8:39342‑M2/94‑147 (MQ=255)
                                                          ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct                                                                                                                                                   >  6:123159‑M2/88‑91 (MQ=255)
                                                          ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAAccc                                                                                          >  1:75202‑M2/88‑148 (MQ=255)
                                                           tttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                                  <  5:123159‑M2/5‑1 (MQ=255)
                                                           gcgcGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctattaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggt                                                                                          <  2:44501‑M2/147‑60 (MQ=255)
                                                                  atctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTgg                                                                                  >  1:62316‑M2/80‑148 (MQ=255)
                                                                   ttgtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcgg                                                                                 <  3:56053‑M2/148‑69 (MQ=255)
                                                                            tCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt                                                                        >  6:91064‑M2/1‑71 (MQ=255)
                                                                            tCGAAACTCTCAAGGGTGGCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtt                                                                        >  8:149685‑M2/1‑71 (MQ=255)
                                                                               tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                                     >  4:45333‑M2/67‑148 (MQ=255)
                                                                                gcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggttatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                                    <  7:90612‑M2/83‑1 (MQ=255)
                                                                                  agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGt                                                                  >  1:96007‑M2/64‑148 (MQ=255)
                                                                                  agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGt                                                                  <  1:32664‑M2/85‑1 (MQ=255)
                                                                                  agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGt                                                                  >  4:45885‑M2/64‑148 (MQ=255)
                                                                                  agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGt                                                                  >  4:43574‑M2/64‑148 (MQ=255)
                                                                                   tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGCGCGTGCCGTCACTtctatcaaacaaaagataaccaactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                 <  6:144201‑M2/148‑85 (MQ=255)
                                                                                   tctcAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                 <  1:52311‑M2/148‑85 (MQ=255)
                                                                                       tgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGa                                                             >  5:149396‑M2/59‑148 (MQ=255)
                                                                                       aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcga                                                                              <  6:39216‑M2/131‑72 (MQ=255)
                                                                                        aGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa                                                                             >  5:39216‑M2/1‑59 (MQ=255)
                                                                                         gggTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatac                                                           >  1:174898‑M2/1‑58 (MQ=255)
                                                                                          cgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTa                                                               <  8:95323‑M2/88‑1 (MQ=255)
                                                                                                tttGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtca                                                    <  2:167992‑M2/148‑98 (MQ=255)
                                                                                                tttGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttcttt                                                                                                                     <  2:3436‑M2/83‑33 (MQ=255)
                                                                                                   gAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                                  >  6:346‑M2/1‑48 (MQ=255)
                                                                                                   gAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                                  >  4:154452‑M2/1‑48 (MQ=255)
                                                                                                    atcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACACCCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAg                                                >  6:31483‑M2/46‑148 (MQ=255)
                                                                                                     gCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacag                                                 <  8:125409‑M2/146‑101 (MQ=255)
                                                                                                      cctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGAc                                              <  5:96488‑M2/105‑1 (MQ=255)
                                                                                                      cAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgtgcactcttctatacgtggtcacagcaa                                              <  7:122830‑M2/148‑104 (MQ=255)
                                                                                                        tgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCCACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGAc                                              >  2:173728‑M2/42‑146 (MQ=255)
                                                                                                        tgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCg                                                                               >  8:132809‑M2/42‑113 (MQ=255)
                                                                                                        gATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagc                                            <  3:165584‑M2/148‑106 (MQ=255)
                                                                                                         gtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                              <  7:132809‑M2/73‑1 (MQ=255)
                                                                                                               tgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGCCGCAGCCGCt                                     >  5:130837‑M2/35‑148 (MQ=255)
                                                                                                               tgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCt                                     <  1:102787‑M2/114‑1 (MQ=255)
                                                                                                                   cgacatcTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacag                                 >  4:162895‑M2/3‑32 (MQ=255)
                                                                                                                   ccACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgggcacagcaagctgtgccgacag                                 >  1:95840‑M2/1‑32 (MQ=255)
                                                                                                                    cacaACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg                                >  8:52094‑M2/1‑31 (MQ=255)
                                                                                                                     acaACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggg                               <  6:107027‑M2/148‑119 (MQ=255)
                                                                                                                       agcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCa                             <  1:117532‑M2/122‑1 (MQ=255)
                                                                                                                       agcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCa                             <  6:157253‑M2/122‑1 (MQ=255)
                                                                                                                       aaCTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggga                              <  8:74599‑M2/147‑120 (MQ=255)
                                                                                                                          gcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGa                           >  2:89885‑M2/24‑147 (MQ=255)
                                                                                                                                 gacgaGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttcta                                                              <  2:92882‑M2/105‑88 (MQ=255)
                                                                                                                                 gacgaGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCg                   >  3:126465/1‑148 (MQ=255)
                                                                                                                                  acgaGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctat                                                             >  1:92882‑M2/1‑17 (MQ=255)
                                                                                                                                      ggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCgggggg              <  3:133725‑M2/137‑1 (MQ=255)
                                                                                                                                       gctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTggg             >  6:106447‑M2/11‑148 (MQ=255)
                                                                                                                                         tgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGc           <  1:89885‑M2/140‑1 (MQ=255)
                                                                                                                                         tgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGc           <  2:96007‑M2/140‑1 (MQ=255)
                                                                                                                                         tGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttg           >  4:56053‑M2/1‑10 (MQ=255)
                                                                                                                                          gACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgg          <  5:11066‑M2/148‑140 (MQ=255)
                                                                                                                                           aCGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg         <  4:8160‑M2/148‑141 (MQ=255)
                                                                                                                                             tgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctc                                                                      >  3:58565‑M2/5‑85 (MQ=255)
                                                                                                                                              gatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGctct                                                                     <  4:58565‑M2/82‑1 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  7:119466‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  1:23246‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  8:32572‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  >  4:106963‑M2/1‑1 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  8:148625‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  5:12057‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct  <  5:138702‑M2/148‑148 (MQ=255)
                                                                                                                                                  ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctctgcctacagcgattaacgccgatgccatttgggccactct  <  5:11527‑M2/148‑148 (MQ=255)
                                                                                                                                                  TCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGcc  >  7:81389‑M2/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCC  >  NC_002947/5621099‑5621392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.