Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 6,150,396 C→T intergenic (‑2580/‑594) PP_5393 ← / → PP_5395 metal‑binding chaperone/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,150,3960CT100.0% 144.9 / NA 43intergenic (‑2580/‑594)PP_5393/PP_5395metal‑binding chaperone/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (24/19);  total (24/19)

TCGGCGTCCGCCGCGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTCCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAAGTAGTTCC  >  NC_002947/6150252‑6150537
                                                                                                                                                |                                                                                                                                             
tCGGCGTCCGCCGCGTTGCTGGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTtcc                                                                                                                                             <  7:68374/147‑1 (MQ=255)
  ggCGTCCGCCGCGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGGTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTc                                                                                                                                           <  7:16037/147‑1 (MQ=255)
    cGTCCGCCGCGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGta                                                                                                                                        <  4:35551/148‑1 (MQ=255)
        cgccgcGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGc                                                                                                                                    <  5:108108/148‑1 (MQ=255)
         gccgcGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCt                                                                                                                                   >  6:134431/1‑148 (MQ=255)
          ccgcGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGCTAACGCACCGGCGCTGCGCGGAATTCCGTCAGGGACTTTTCCCTGCAGCAGCGGTATGTCCTTTCCTCGTATAGCt                                                                                                                                   >  7:45211/1‑147 (MQ=255)
                   ttGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCg                                                                                                                         >  2:132106/1‑148 (MQ=255)
                     ggCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGa                                                                                                                        >  5:4243/1‑147 (MQ=255)
                        tGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTAt                                                                                                                    >  6:123104/1‑148 (MQ=255)
                                  ccGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCAc                                                                                                          >  5:79595/1‑148 (MQ=255)
                                                       gtTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATc                                                                                     <  1:57346/148‑1 (MQ=255)
                                                       gtTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATc                                                                                     <  5:125339/148‑1 (MQ=255)
                                                           ttGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCgcgc                                                                                 >  5:54736/1‑148 (MQ=255)
                                                           ttGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCACGTATAGCTCGAAGTAGCGACTATCCGGTCGCACCGTCATACCGCATACCAAATCgcgc                                                                                 >  8:65483/1‑148 (MQ=255)
                                                              gTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCt                                                                                <  1:174831/146‑1 (MQ=255)
                                                              gTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGa                                                                              >  5:81845/1‑148 (MQ=255)
                                                               tCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGa                                                                              >  3:32057/1‑147 (MQ=255)
                                                               tCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGa                                                                              >  5:148173/1‑147 (MQ=255)
                                                               tCCTGGAGAGGGCTAAGATAACGCACAGGCGCGGCGCGGAATTCCGGCAGGCACTTTTCACTGCAGCAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGa                                                                              <  7:155526/147‑1 (MQ=255)
                                                                            tAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCAcc                                                                                                         >  8:140945/1‑107 (MQ=255)
                                                                                  aaCGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATg                                                          >  6:132749/1‑148 (MQ=255)
                                                                                       acaGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGtt                                                     <  6:79595/148‑1 (MQ=255)
                                                                                       acaGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGtt                                                     >  1:162410/1‑148 (MQ=255)
                                                                                           gcgcTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGa                                                 <  5:24357/148‑1 (MQ=255)
                                                                                                  gcgGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCa                                          >  2:16018/1‑148 (MQ=255)
                                                                                                           cGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGc                                 >  8:21448/1‑148 (MQ=255)
                                                                                                           cGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGc                                 >  8:104690/1‑148 (MQ=255)
                                                                                                            gTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGc                                 <  8:114155/147‑1 (MQ=255)
                                                                                                                ggCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGc                             <  6:54736/147‑1 (MQ=255)
                                                                                                                 gCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCa                            >  4:159366/1‑147 (MQ=255)
                                                                                                                 gCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCa                            >  3:100079/1‑147 (MQ=255)
                                                                                                                 gCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCa                            >  8:87917/1‑147 (MQ=255)
                                                                                                                 gCACTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCa                            >  8:90110/1‑147 (MQ=255)
                                                                                                                   aCTTTTCACTGCAGAAGCGGTATGTCGTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGa                         >  6:78691/1‑148 (MQ=255)
                                                                                                                   aCTTTTCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGa                         <  2:143061/148‑1 (MQ=255)
                                                                                                                     ttttCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGAtt                       >  4:131242/1‑148 (MQ=255)
                                                                                                                        tCACTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCg                     <  5:118499/147‑1 (MQ=255)
                                                                                                                          aCTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGCCTACCATCCGGTTGCTCTTGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGgtg                  >  3:125884/1‑148 (MQ=255)
                                                                                                                           cTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGgtg                  <  1:84150/147‑1 (MQ=255)
                                                                                                                           cTGCAGAAGCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGgtg                  <  8:154976/147‑1 (MQ=255)
                                                                                                                                   gCGGTATGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAag         <  5:134431/148‑1 (MQ=255)
                                                                                                                                    cGGTATGTCCTTTCCTCGTATAGCTCGAACTAGCGACTATCCGGGGGCACCGGCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAagt        <  2:170995/148‑1 (MQ=255)
                                                                                                                                        aTGTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAAGTAGtt    <  1:132106/148‑1 (MQ=255)
                                                                                                                                          gTCCTTTCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCACACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAAGTAGTTcc  <  5:123104/148‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                             
TCGGCGTCCGCCGCGTTGCTTGGCTGCGGGGCAGCCGAGTGGAGATGGCCCGCGTGTTCTTGGTCCTGGAGAGGGCTAAGATAACGCACAGGCGCTGCGCGGAATTCCGTCAGGCACTTTTCACTGCAGAAGCGGTATGTCCTTCCCTCGTATAGCTCGAAGTAGCGACTATCCGGTGGCACCGTCATACCGCATACCAAATCGCGCTGACTACCATCCGGTTGCTCATGCGGTTGCGAGTGGTCATGGTCGTGCTGGCACGATTCGGTGTGCATGAAGTAGTTCC  >  NC_002947/6150252‑6150537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑