| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4647557 = | 54 (0.780) | 6 (0.120) | 5/206 | 7.3 | 14.1% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4647665 = | 34 (0.670) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAG > NC_002947/4647525‑4647813 | tCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTTAAAAACCACCAACAGGGTTGCCGGCGGCCCAAAAAATGTGGGCCCCCCCGTATGGGAGGGGTTAACCGCGAAAAGGCCCG‑CAAAGccccccac > 6:326958/1‑143 (MQ=255) agaagaGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCCCACCTACAGGATGGCCGCCGGCCCAAACATTGTGCGCCCCCCAGTAGGAGCGGGGTTAGCCGCGAAGAGGCCGG‑CACCGACCGCAACCGtt > 7:375787/1‑149 (MQ=38) agagCCGCGGGGTGTATGCGTTTCTCCTGTGCGGCCGTCTTCGCGGGTAACCCCGTTCATACCGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCGTGTCGTTGCGGGTTTACCCGCTAAGAGGCCGG‑CACAGACCGCAACAGTTTTc < 8:125623/149‑1 (MQ=255) gCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTcgcccgcc < 5:378607/149‑1 (MQ=255) gCGGGTCCCCTGTGCCGGCCTCTTCGCGGTTAAACCCCCTCCTCCAGTATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTcgcccgcc < 8:375787/149‑1 (MQ=38) ctcCGGGGCCGGCCTCTGCGCGGGAAACCCCGCACCTACCGCATGCCCGCCGCCCCAACCATTGGCCCCCCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCtt < 5:326958/148‑1 (MQ=25) gCCTCTTCGCGGGAAAACCCGCGCCTCCCGCAGGGCCGCCGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTAACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGcttctt < 3:292358/149‑1 (MQ=38) tctTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTGAACAGCTTCTTGCa > 6:287157/1‑149 (MQ=255) cgcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCg < 1:42646/148‑1 (MQ=255) gggTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc < 3:78529/143‑1 (MQ=255) gggTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc > 4:78529/1‑143 (MQ=255) gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 1:304298/1‑149 (MQ=255) gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGca > 6:20878/1‑149 (MQ=255) cTCCTACAGGATGGCCGCCGGCCCAAACATTGTGCGCCCCCCTGTTGGAGGGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcac < 1:49895/149‑1 (MQ=255) gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAGACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACgcgc > 1:320678/1‑148 (MQ=255) gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTg > 7:98399/1‑120 (MQ=255) gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTg < 8:98399/120‑1 (MQ=255) gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCa > 4:99328/1‑148 (MQ=255) gCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGc > 8:358070/1‑149 (MQ=255) ccGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCt > 5:200744/1‑149 (MQ=255) cGCCGGCCCAAAAATCGTCCGCCCCGCTGTTGGTCCGGGATTACCCGAGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCtt < 8:355555/149‑1 (MQ=255) gCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAACGCACCACGCGCAAATGCTTg > 2:388495/1‑149 (MQ=255) ggCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGccc < 5:287157/149‑1 (MQ=255) gCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCg > 8:19575/1‑149 (MQ=255) ccAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGcc > 4:230842/1‑149 (MQ=255) ccAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGcc > 8:53754/1‑149 (MQ=255) aaCATTGTGCGCCCCCCTGTAGTAGCGGGTTAACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTg < 5:375169/149‑1 (MQ=255) aaCATTGTGCGCCCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTg < 2:96172/149‑1 (MQ=255) aaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTg > 5:250717/1‑149 (MQ=255) aTTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCa < 2:320678/149‑1 (MQ=255) gtgCGCCCCCCTGTAGCAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATa < 5:130246/148‑1 (MQ=255) gcgcCCCCCTGTAGGAGTGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCa > 6:304708/1‑98 (MQ=255) cccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTcg > 8:290798/1‑149 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTcgcg > 6:131672/1‑149 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCgcgc < 7:358070/149‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg > 8:48199/1‑149 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg > 4:240743/1‑149 (MQ=255) gCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCtt > 3:109957/1‑124 (MQ=255) gCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCtt < 4:109957/124‑1 (MQ=255) aCCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGcgccg > 7:339187/1‑148 (MQ=255) ccGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCaa > 8:158617/1‑149 (MQ=255) ccGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCaa > 3:261602/1‑149 (MQ=255) cgcgAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAAc > 3:39480/1‑149 (MQ=255) gcgAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACg < 6:133083/149‑1 (MQ=255) gAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGc > 7:324193/1‑149 (MQ=255) agGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCTCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaa < 5:20878/149‑1 (MQ=255) ggCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaat < 4:161491/149‑1 (MQ=255) gCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaat > 3:103616/1‑148 (MQ=255) gCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaat > 4:270833/1‑148 (MQ=255) gCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaa < 8:1362/147‑1 (MQ=255) gCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaa > 7:1362/1‑147 (MQ=255) g‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATc > 1:17552/1‑148 (MQ=255) cacaGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGa < 6:250717/149‑1 (MQ=255) acaGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCTCATCAACACCATCTTGCACCGCTCCGACAAATGCACCACCCGCAAATGCTTGCCCGCCATGGCATAGCGCTAGCGCAGGGTTTTAAGCGCCGCAACGGCCGAATAATCGa > 1:273301/1‑148 (MQ=255) acaGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCCCAACGGCCGAATAATCGAc < 2:304298/149‑1 (MQ=255) aCCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAg < 6:200744/149‑1 (MQ=255) | TCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGG‑CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAG > NC_002947/4647525‑4647813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |