| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,845,703 | 1 | . | G | 94.6% | 179.5 / 3.8 | 56 | intergenic (‑70/+28) | PP_3394/PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (35/18); total (36/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAGCGC > NC_002947/3845559‑3845844 | tgctgTCGGCATGATCACTTGCCGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGACAGCCTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gg > 5:281611/1‑147 (MQ=255)tgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gg > 1:114492/1‑147 (MQ=255)tgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gg > 7:179632/1‑147 (MQ=255)tgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gg > 5:302091/1‑147 (MQ=255) tgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggc > 3:229260/1‑144 (MQ=255) tgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑ggg < 5:60113/145‑2 (MQ=255) gTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGGCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctg < 8:22870/147‑5 (MQ=255) tCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctga > 8:87570/1‑142 (MQ=255) tCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctga < 6:349215/147‑6 (MQ=255) tCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctga > 5:64504/1‑142 (MQ=255) tCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctga > 3:291819/1‑142 (MQ=255) cGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑gggctga > 1:95557/1‑142 (MQ=255) gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATc > 8:94783/1‑146 (MQ=255) gATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCg < 6:53764/147‑1 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACg > 1:18594/1‑147 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGa < 2:114492/147‑1 (MQ=255) aGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGa < 7:289970/147‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGa < 4:291819/147‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGa < 4:229260/147‑1 (MQ=255) tctGCAAGCCATCGCGCAGCCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGACTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGATTC‑G‑CGGG‑CAGATCCATCGACAGCCACGATGGa > 5:43728/1‑147 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGTTATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGa < 1:298757/145‑1 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATctg > 4:332981/1‑145 (MQ=255) aaGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGc > 1:23071/1‑147 (MQ=255) aGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GTTGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGcc > 7:203784/1‑147 (MQ=255) cATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCcgc > 2:10032/1‑147 (MQ=255) aTCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCcgc‑g > 6:284422/1‑147 (MQ=255) tCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCCCGATGGATCAGCCCgc‑gc > 4:376685/1‑147 (MQ=255) cAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGATCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTg > 2:96700/1‑146 (MQ=255) ccGACTTCA‑TTGATTTTTATTGTTGTCATCGCGGTCTCTGTGTCTGAAGCGTTGGGCCATACTAATAGCTG‑CATGAGGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAgg < 7:94783/147‑1 (MQ=255) ccGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAgg > 6:334033/1‑147 (MQ=255) aCTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGCAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGAGGGATCAGCCAGC‑GCCCTGCCAGGACg > 4:263924/1‑147 (MQ=255) aCTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑GAG‑GG‑CTGATCCATCGTCACCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCg > 1:176311/1‑147 (MQ=255) tCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTg > 8:39244/1‑147 (MQ=255) ttgattgTTATTGTTGTCCTCGCGGCCGCTCTGTCTTCACGGTTGCGCCAGAATAAGAGCTG‑GAGCACGGGCAGAAAAGACGGGTGTC‑G‑CGGG‑CTGAACCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCAc < 5:110273/147‑1 (MQ=255) ttgattgTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCAc > 1:292135/1‑147 (MQ=255) tgattgTTATTGTTGTCATCCCGGTCTCTCTCTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGACTTTC‑G‑CGGG‑CTTATACATCGGCAGCCACGATGGATCAGCACGC‑GCCCTGCCAGGACGGTGcca > 6:138706/1‑144 (MQ=255) ttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACgcagca > 4:365125/1‑146 (MQ=255) ttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CAGATCCATCGTCAGCCACGATGGATCATCCCCC‑GCCCAGCCAGGCCGGTGGACCCAGCCACAggtg > 5:46379/1‑147 (MQ=255) tCATCGGGGTCTCTCTGTCTTAAGGGTTGCGCCAGACTAAGTGGTG‑GATGAGGGGCATAAAAGACGTGTTTCGG‑G‑GG‑CTGATCAATCGTCAGCCACGATGTATATGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt < 2:95557/146‑1 (MQ=255) cATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt > 5:110884/1‑145 (MQ=255) tggctgcctctctTGCTGAAGCGTTGCCCCAGACTATCAGGTG‑GCTCCCGGGCAGAAAAGCCGTGTTTC‑G‑CGGG‑CTCACCCATCGTCCGCCAGCATGTACCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAg < 6:302091/140‑1 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCa > 7:41173/1‑147 (MQ=255) cgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGAATGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTTGTAAAGccg > 3:27108/1‑145 (MQ=255) ggTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg < 1:76709/147‑1 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccga > 7:325357/1‑147 (MQ=255) ctgtctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag > 2:227819/1‑147 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt < 1:285229/130‑1 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt > 2:285229/1‑130 (MQ=255) ctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCTTCGTCAGCCACGATGGATCAGCCCGCAGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgag < 1:96700/144‑1 (MQ=255) ctgAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagc < 6:64504/144‑1 (MQ=255) gAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCTGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 1:276680/1‑134 (MQ=255) gAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCTGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 1:281885/1‑134 (MQ=255) gAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATAAGCCCGC‑GCCATGCCAGGCCGGTGAAGGCAGCAAAAGTTGGTCAAGCAGGCGCCGACCCGACa > 3:126697/1‑147 (MQ=255) aGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCCGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAg > 6:211890/1‑146 (MQ=255) gcgcCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAg > 3:129316/1‑113 (MQ=255) gACTAAGAGCTG‑GAGGACGGGCAGAAACGACGGGTGTC‑G‑CGGG‑CTGATCCAGCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGc < 5:117415/147‑1 (MQ=255) gagCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcg > 6:306855/1‑147 (MQ=255) gagCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATACATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCCGGCCCGTGCACGCACCAACACGTGGTCAAGCCGGCGCCGCGCCGACAGCGAGAGCGTGTGCCGGTcg > 8:127398/1‑147 (MQ=255) gattaatgACGTGTTTC‑T‑C‑GGTGTGATCATTGGTAAGCTAGGTTGTATCTGCCGGC‑GCCCTGACAGGCCTGTGCACGCAGCATGAGGTTGTCTAGCAGGCGCCGAGCGGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACg < 2:58158/140‑1 (MQ=255) cAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCCCGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGagc > 1:141518/1‑145 (MQ=255) cAGAAAAGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCAAGAAGCATCAGCCCGA‑GCCCAGCCAGCACGGTGCACGCAGCAACAGGTGCTCAAGCAGCCGCCGAGCCGACAGCGAGATCGTGTTCCGCTCGCGCATGCAGAt > 1:77577/1‑143 (MQ=255) aaaGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAt > 5:380233/1‑146 (MQ=255) aaaGACGTGTTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAt > 5:369643/1‑146 (MQ=255) tgaggtgtTTG‑G‑CGGG‑ATGATCCATCGTCAGCCACTTTGTTTCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCa < 1:10032/143‑1 (MQ=255) gcggtgtTTC‑G‑CGGG‑CTGATCCAGCGTCACCCAGTAGGTATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAc < 1:307132/144‑1 (MQ=255) tgtTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGCGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAg < 2:18594/147‑1 (MQ=255) tgtTTC‑G‑CGGG‑CTGATCCATCGTCAGCCACGAGGCATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAg < 8:66029/147‑1 (MQ=255) ttC‑G‑CGGG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAgcgc > 5:165845/1‑147 (MQ=255) | TGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCA‑TTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTG‑GATGACGGGCAGAAAAGACGTGTTTC‑G‑C‑GG‑CTGATCCATCGTCAGCCACGATGGATCAGCCCGC‑GCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAGCGC > NC_002947/3845559‑3845844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |