| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2054725 | 76 (1.100) | 4 (0.060) | 3/260 | 4.4 | 5.6% | intergenic (‑100/‑135) | PP_1829/aroC | alpha/beta family hydrolase/chorismate synthase |
| ? | NC_002947 | = 2054761 | 67 (1.070) | intergenic (‑136/‑99) | PP_1829/aroC | alpha/beta family hydrolase/chorismate synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2054570‑2054725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCAAACCCACACCTCCCCATGTAGTACCGCATGATGTCGC < NC_002947/2054761‑2054619 GCGGACTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACC > 6:103997/1‑147 GGCCTTGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCG < 5:379903/147‑1 GGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCG > 8:325498/1‑147 GGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCG > 2:169748/1‑147 GGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCG > 4:1396/1‑147 CCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCT < 4:26146/147‑1 GCCAGTCCAGGGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACACAATGTTTGCGGTAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTA < 7:163124/146‑1 GCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTA < 1:169748/146‑1 GCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTA < 7:325498/146‑1 ACATCATGCGGTACTACATGGGGAGGGGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAG < 4:196155/147‑1 CCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCG > 5:104881/1‑112 CCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCG < 6:104881/112‑1 aGCGGGTTTACCCGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCAAACCCACACCTCCCCATGTA > 8:358887/2‑147 CGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCAAACCCACACCTCCCCATGTAGTACCGCATGAT > 6:15828/1‑147 CGCTCCTACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCAAAAAAAAATAGAACGATACCGCAAACATTGGGTCAAACCCACACCACCCCAAGTAGTACCCCATGAT > 1:318144/1‑147 TACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCTAACCCACACCTCCCCATGTAGTACCGCATGATGTCG < 4:304311/145‑1 TACACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCAAACCCACACCTCCCCATGTAGTACCGCATGATGTCGC < 1:268562/146‑1 GCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2054570‑2054725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacACGGTCACCACCAGGTTCCAATGGTGTGCAGCCCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGACCTGCCCTGCATAGAACCTTCCCGCAAACATTGGGTCAAACCCACACCTCCCCATGTAGTACCGCATGATGTCGC < NC_002947/2054761‑2054619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |