| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 278743 = | 66 (0.980) | 13 (0.210) | 10/246 | 6.1 | 18.4% | intergenic (‑238/+76) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| ? | NC_002947 | 278794 = | 56 (0.920) | intergenic (‑289/+25) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/278902‑278743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggttTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAG > NC_002947/278794‑278936 GCCAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGT < 6:231465/149‑1 CCAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTA < 2:131302/149‑1 CCAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTG > 4:173462/1‑147 CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAG > 5:105702/1‑149 CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGT < 1:240897/147‑1 CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGT > 2:240897/1‑147 CCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCCCAGATCTTGAGGCATGTGTGTAGGAGCGG > 4:108446/1‑149 CCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGG > 2:268154/1‑149 CCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGG < 3:173462/149‑1 CCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCAGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTTTGTAGGATCGG > 7:208269/1‑149 CTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCAACTACAGTGAACAAATGATTGGGGATGTGTGTTGGAGCGGG > 8:61419/1‑149 TTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGT < 3:10992/147‑1 AGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCG > 2:256408/1‑149 CGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGTGCACAGATCTTGAGGCATGTGTGTAGGCGCGGGTTTACCCGCG > 5:373308/1‑146 GAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAA > 2:318832/1‑147 GGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATGTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAgaggc > 4:342209/1‑144 GGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAgagcc < 3:332960/149‑6 GAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAgagccc < 4:283833/149‑7 TCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGA < 5:75284/79‑1 TCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGA > 6:75284/1‑79 ACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAA > 5:112578/1‑147 CCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGG > 6:26125/1‑149 GCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGC < 6:112578/149‑1 GCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGC > 6:31149/1‑149 GCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGC > 8:336466/1‑149 TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTT > 6:297415/1‑149 GGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCCTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTC < 3:283833/149‑1 GCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCG > 2:12656/1‑147 CGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAG < 6:413538/149‑1 GGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAG > 7:8859/1‑148 GCCAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/278902‑278743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggttTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAG > NC_002947/278794‑278936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |