Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	155.5 / NA	47	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (22/25);  total (22/25)

GGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAT  >  NC_002947/6013747‑6014026                                                                                                                                             |                                                                                                                                              ggCCCGGGTGAAGTCGGTGGATGGTGGTGTGGTCTGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGcc                                                                                                                                     <  2:128611/149‑1 (MQ=255)  gCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCg                                                                                                                                    >  6:178889/1‑149 (MQ=255)      gggTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTAGAAAGCTGTGCCGTAACTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAAc                                                                                                                                >  5:364202/1‑149 (MQ=255)              tCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATgg                                                                                                                                       <  1:313386/134‑1 (MQ=255)              tCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATgg                                                                                                                                       >  2:313386/1‑134 (MQ=255)              tCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACCCCCGCAACCACAGGTGCAGCACAGGGATGGAACGGTGTGGCGGACCTGTGGG‑AGAGGGCGGGGCCCCGAAAGGCCGCAACCCGTTTa                                                                                                                         >  7:249114/1‑148 (MQ=255)                gCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATc                                                                                                                       <  8:111518/148‑1 (MQ=255)                    gAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGGCACCCCCCCACCCACAGGTGCAGCACAGGGCTCGAACGGGGTGCCGTACCAGTGGG‑CGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATATGGt                                                                                                                   >  2:114562/1‑149 (MQ=255)                    gAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                                  <  1:114562/149‑1 (MQ=255)                    gAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGt                                                                                                                   <  5:178889/148‑1 (MQ=255)                     aaGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCCCGCCCCCACCCACAAGTGGAGCACAGGTCACGAACGCGGTGCCCTAACAGTGGG‑AGCGGGCGGGCCCGCGCATTGCCCCCAACCGTTTATATgggtt                                                                                                                 >  6:133825/1‑146 (MQ=255)                       gggggtgtgggCAGCTTCATCGAATAATCGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACCGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgcc                                                                                                               <  5:396849/146‑1 (MQ=38)                           gggtggtCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCa                                                                                                           <  5:133825/147‑1 (MQ=255)                                 tCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCg                                                                                                     <  2:77689/149‑1 (MQ=255)                                     cTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCtt                                                                                                                            <  5:239723/122‑1 (MQ=255)                                     cTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaa                                                                                                 >  5:119078/1‑149 (MQ=255)                                             aaTAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCCCACGTGCCGCACAGGTGTCGAACCCGGTGCCGTAACGGTGGG‑AGCGGGCGTGCCCGCGAATTGCCGCCACCCGTTTAAATGGGTGGCCCCCGCCCCGCccacaacaacc                                                                                         >  8:99255/1‑147 (MQ=19)                                                 aaCGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTg                                                                                     <  2:327177/149‑1 (MQ=255)                                                  aCGCGACACCTGCTTCGC‑CGGCACCCCCCCAACCAAAACTGCCACACAGCTCTAGAACACATAGGCGGACCAGAAGC‑AGCGCGCGAGCCCCCGAAAGGCCGCAAACCATTTATATAGTTGCCGACAGCACCGCcaaaaaaaaacccagg                                                                                    >  6:346323/1‑142 (MQ=255)                                                     ctacagCTGCTTGGT‑GGGGACGCCGGCTCGCACAGGTGCAGCACAGGTCTCGAACGCTTTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTaa                                                                                 <  5:346323/147‑1 (MQ=38)                                                                tCGG‑GGGCACGCCCGCTCCAACTGGTTGACAACAGGTCTCGAAGCGTGT‑CCGTTACTGGGGGTTGGGGGGGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTcttctt                                                                       <  8:325790/148‑1 (MQ=255)                                                                  gc‑gTGCACGCCCGCTCCCACAGGTGCAGCAGAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                    <  7:374571/149‑1 (MQ=255)                                                                   c‑gGGCACGCCCGCTACCACAGGTGCAGCACAGGTCACGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTAACAGGTTGCCCACAGCCCCGCCAACCACAAGCCCTGGTAAATTTCTTATTTAAg                                                                   >  4:28726/1‑149 (MQ=37)                                                                       gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGccc                                                                <  8:249114/149‑1 (MQ=255)                                                                       gCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCGGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGccc                                                                >  1:380264/1‑149 (MQ=255)                                                                          cGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTg                                                             <  6:119078/149‑1 (MQ=255)                                                                           gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                            >  1:358218/1‑149 (MQ=255)                                                                              cGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGc                                                         >  3:244420/1‑149 (MQ=255)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                    <  6:364202/149‑1 (MQ=255)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                      <  7:99255/147‑1 (MQ=255)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                      <  4:244420/147‑1 (MQ=255)                                                                                   ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGATGcag                                                    >  6:353993/1‑147 (MQ=255)                                                                                     acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                    <  5:390305/147‑1 (MQ=255)                                                                                     acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                    >  6:390305/1‑147 (MQ=255)                                                                                         gTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTg                                              >  5:52391/1‑149 (MQ=255)                                                                                                    gTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                     >  2:113852/1‑147 (MQ=255)                                                                                                    gTCTCGAACGCTGTGCCGTACCTGTGCG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTAATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGCTAAAGTTCTTCTTTAAGCCCCTGCGGCTCCCCCAACTCCATCCGcac                                     >  2:113846/1‑145 (MQ=255)                                                                                                     gctctAACGCAGGGCCGAACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCATTTATCTGGTTGCCGCCAGCCCCGCCAACAACCAGCGCTGGTAAAGTGCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                                  <  6:380167/148‑1 (MQ=255)                                                                                                       tcGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                                >  5:221727/1‑149 (MQ=255)                                                                                                         gAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTTGTAAAGTTCTTCTTTAAGCCCATGCGGCTGCCCCAACTGCATCCGCCCCAGGtag                              <  3:28726/149‑3 (MQ=255)                                                                                                         gAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTgg                              >  7:202185/1‑149 (MQ=255)                                                                                                            cGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                           <  1:113846/149‑1 (MQ=255)                                                                                                            cGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                           <  1:113852/149‑1 (MQ=255)                                                                                                                         cTGTGGG‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCg              >  6:178793/1‑149 (MQ=255)                                                                                                                              gg‑AGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcccc         <  6:221727/149‑1 (MQ=255)                                                                                                                                   cGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg     >  4:95563/1‑149 (MQ=255)                                                                                                                                      gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAt  <  6:52391/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                              GGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC‑GGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGG‑AGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAT  >  NC_002947/6013747‑6014026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑