| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,499,480 | 2 bp→AC | intergenic (+57/‑106) | trpS → / → zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,499,480 | 0 | C | A | 100.0% | 64.5 / NA | 25 | intergenic (+57/‑107) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (13/12); total (13/12) | |||||||||||
| * | NC_002947 | 1,499,481 | 0 | A | C | 100.0% | 69.0 / NA | 25 | intergenic (+58/‑106) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (13/12); total (13/12) | |||||||||||
CGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGTT‑TCGGGCA‑CG‑C‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTA > NC_002947/1499339‑1499606 || cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCtt > 6:187522/1‑149 (MQ=255)cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCtt < 5:329420/149‑1 (MQ=255) cGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGc < 2:383721/149‑1 (MQ=255) aaGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑cg‑c‑ccg < 5:163613/147‑3 (MQ=25) gTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCt < 6:390810/116‑1 (MQ=255) gTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCt > 5:390810/1‑116 (MQ=255) ggCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTAGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGAt > 2:44738/1‑149 (MQ=25) gagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCAtt > 5:189673/1‑147 (MQ=21) tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCTAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGc < 1:323676/138‑1 (MQ=21) tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCC‑CGCC‑CGC‑GCCCACAGACAGATTGc > 2:323676/1‑138 (MQ=18) aaCGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGGCCGCGAAACCGGCGCCGCGGTGCATGGCACCCGGGTTGCCGGTGTTCGCGGGGC‑CGCC‑CGC‑GGCCCCAGACGGATTGGCATTTAGCgggga > 1:315193/1‑147 (MQ=255) gACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCCCAACCGGCGCCCCCGGGCATGGCACCCGCGTTGGCGGTGTTAGCGGGCACCC‑C‑CGC‑GCCCCCACACAGAATTCCAATAAGCCGGCCCATCGCGACACTGGCGGGCCCGtt > 8:283524/1‑149 (MQ=255) gACTGAGGCTGCAAAACTGTGGGAGCGGGCGTGTCCGCGAAACATGCGCCGCGGTGCATGGCACAGGCTTTGCCGGTGTTCGCGGGCA‑CG‑CACGC‑TCCCAAAGACAGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGACCGgtt > 8:247449/1‑149 (MQ=18) ggCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTttgtt < 1:44738/149‑1 (MQ=21) gCCAACCGGGGGGAGCGGGCGTCCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCt < 7:283524/149‑1 (MQ=21) cGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTaa < 5:187522/149‑1 (MQ=21) atcgggAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAAc < 7:152715/146‑1 (MQ=21) gCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCAt < 3:37650/149‑1 (MQ=25) gggCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGa > 7:71432/1‑149 (MQ=25) gCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACt > 5:51365/1‑149 (MQ=25) gTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTcc < 6:189673/149‑1 (MQ=25) cccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCt > 7:201223/1‑148 (MQ=37) aGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGCGTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTa > 1:303119/1‑149 (MQ=37) ggtgccgcGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGc < 2:74105/77‑1 (MQ=14) ggtgccgcGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCA‑CGCC‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGc > 1:74105/4‑80 (MQ=14) || CGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGTT‑TCGGGCA‑CG‑C‑CGC‑TCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGAC‑GGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTA > NC_002947/1499339‑1499606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |