| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,179,341 | G→A | L445L (CTG→TTG) | PP_2790 ← | sigma‑54 dependent sensory box protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,179,341 | 0 | G | A | 97.3% | 246.2 / ‑3.4 | 74 | L445L (CTG→TTG) | PP_2790 | sigma‑54 dependent sensory box protein |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (30/42); total (31/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCA > NC_002947/3179200‑3179484 | aaTACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCgtg > 6:156143/1‑147 (MQ=255)aaTACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCgtg < 6:331241/147‑1 (MQ=255) tACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGtt < 6:144516/147‑1 (MQ=255) gggcGGTACGGACATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGGGGCGTCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 8:195181/145‑1 (MQ=255) ggTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 1:59209/148‑1 (MQ=255) ggTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 2:5639/148‑1 (MQ=255) gTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCACGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 1:300680/148‑1 (MQ=255) gTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 4:159221/147‑1 (MQ=255) gTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 4:276420/147‑1 (MQ=255) tCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg > 5:164073/1‑146 (MQ=255) gTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGaca > 2:222523/1‑148 (MQ=255) gAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCgg < 4:199491/147‑1 (MQ=255) gAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCg > 6:12925/1‑146 (MQ=255) aaTCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCGAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCa < 5:44858/147‑1 (MQ=255) aaTCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCa < 5:267985/147‑1 (MQ=255) gCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCg < 8:351482/148‑1 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGcc > 8:122495/1‑148 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGc > 5:275917/1‑147 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGAGGCAATGATGCGCACGTCGATGGCAAACAGTGTTCGGTGCTGCCCAGGCGCA‑GGCCTTCGCGCTCTTGCAGAACGCGAAGCAAGCGTGTTTGCAGCGACACCGGCATGTCg > 1:338226/1‑148 (MQ=255) gcgcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCtcgtcg < 7:122495/147‑1 (MQ=255) gcgcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCtcgtc > 2:364801/1‑146 (MQ=255) gcgcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCtcgt > 6:326371/1‑145 (MQ=255) cgcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCtcgtcg < 4:112418/146‑1 (MQ=255) gcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCCGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTGGCCGATCTCGTCGAg > 7:61065/1‑147 (MQ=255) gcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAg < 6:164073/147‑1 (MQ=255) ggTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGt > 8:351923/1‑148 (MQ=255) tgtgGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAg > 5:290236/1‑103 (MQ=255) tgtgGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAg < 6:290236/103‑1 (MQ=255) tgggtggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg < 1:109031/147‑1 (MQ=255) tgggtggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg > 2:109031/1‑147 (MQ=255) gggtggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg < 5:12925/146‑1 (MQ=255) gggtggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg < 4:15262/146‑1 (MQ=255) ggtggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGTGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGgtgt < 8:170167/148‑1 (MQ=255) tggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGTAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGtgc > 2:333790/1‑148 (MQ=255) tggCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGGAAGCGTGTTTGCAGCGACACCGGCATGTCGCGGATCTCGTCGAGGATCAGCGTGCCGCGGtgtg < 5:274064/147‑1 (MQ=255) cggcAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg < 4:329515/140‑1 (MQ=255) cggcAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCgg > 3:329515/1‑140 (MQ=255) cggcAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGtgctg > 3:157272/1‑147 (MQ=255) atgatgCGCACGTCGATGGCAATC‑G‑GTGCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGa < 8:385070/148‑1 (MQ=255) tgatgCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGa < 6:416223/147‑1 (MQ=255) gatgCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGaa > 2:277836/1‑147 (MQ=255) cgcACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAgg < 2:60632/147‑1 (MQ=255) cACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCt > 7:294039/1‑148 (MQ=255) tCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCt < 2:338226/148‑1 (MQ=255) tCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCt > 1:192904/1‑148 (MQ=255) aTC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGtgtg < 6:227676/118‑1 (MQ=255) aTC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGtgtg > 5:227676/1‑118 (MQ=255) gttcggtGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgcg < 7:351923/148‑1 (MQ=255) gtGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAg < 3:104834/147‑1 (MQ=255) ctgcCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCg > 4:82514/1‑147 (MQ=255) tgcCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGccac < 5:233270/147‑3 (MQ=255) ccAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGgtg < 8:46026/100‑1 (MQ=255) ccAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGgtg > 7:46026/1‑100 (MQ=255) ccAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTAGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGaa < 1:140725/148‑1 (MQ=255) cAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGaa > 4:186162/1‑147 (MQ=255) cAGGCGCA‑GGACTGCGCGCTCATCCAGCACGCGCACCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAg < 8:335782/148‑1 (MQ=38) ggCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAgg < 5:326371/147‑1 (MQ=255) a‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCtt < 1:277836/148‑1 (MQ=255) cTTCGCGCTCTTGTAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTc < 1:333790/148‑1 (MQ=255) cgcTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAg > 5:52357/1‑147 (MQ=255) gcTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGcc < 2:192904/148‑1 (MQ=255) ctctTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGCCACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGc > 5:216965/1‑146 (MQ=255) ctTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCAGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGAAGCCGa > 5:60650/1‑147 (MQ=255) cagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGcc < 3:354338/93‑1 (MQ=255) cagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGcc > 4:354338/1‑93 (MQ=255) cagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgcg > 8:133678/1‑111 (MQ=255) cagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgcg < 7:133678/111‑1 (MQ=255) cagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGcgcg < 4:95271/113‑1 (MQ=255) gcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTc < 1:364801/148‑1 (MQ=255) aCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAAt < 2:325457/144‑1 (MQ=255) aCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAAt > 1:325457/1‑144 (MQ=255) cgcAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACtt > 4:73130/1‑147 (MQ=255) cgcAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACtt > 5:239083/1‑147 (MQ=255) gcagcaAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACttt < 6:52357/147‑1 (MQ=255) agcaaGCTTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCa < 8:294039/148‑1 (MQ=255) agcaaGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCa < 1:169088/148‑1 (MQ=255) | AATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATC‑G‑GTTCGGTGCTGCCCAGGCGCA‑GGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCA > NC_002947/3179200‑3179484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |