Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	198.9 / NA	57	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (24/33);  total (24/33)

GCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013744‑6014027                                                                                                                                              |                                                                                                                                                gCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            <  8:231076/147‑1 (MQ=255)  cTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATg                                                                                                                                          >  7:88622/1‑148 (MQ=255)        cGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATACACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGCATCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCa                                                                                                                                    <  1:323343/148‑1 (MQ=255)               aGTCGCTGGAAGGTGGGGTGGGCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCttt                                                                                                                             <  1:217060/148‑1 (MQ=255)                 gcgcgGGACGGTGGGGGGGTCAGCGTCATCGAATCCCCGCGACCCCGGCTGCGCGGGCCCGCCCGCGCCCCCCGGTGCACCACAGGTCGCGACCGCTGTGCCGTACCTGGGGGCGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTa                                                                                                                           <  7:150020/147‑1 (MQ=255)                    ctagAAGGGGGTGTGCGCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATc                                                                                                                         <  5:126119/144‑1 (MQ=37)                        aaGGTGGTGTGTTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTg                                                                                                                       <  4:402533/145‑1 (MQ=255)                          ggtggtGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATTGCCGCAACCCTTTTATCTGGTTgc                                                                                                                  >  7:320016/1‑148 (MQ=255)                          ggtggtGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTACCACAGGTGCAGCACAGGTCTAGAACGCTGTGCCGTACCAGTGGGACCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgc                                                                                                                  >  1:279141/1‑148 (MQ=39)                               tgtggtCATCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACCGGTGCACCACCGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgccgcc                                                                                                              <  5:389633/147‑1 (MQ=38)                                 tggtCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCCCAACCACAGGTTCAGCAAAGGTATCGAACGCGGGGCCGTAACGGTGGGAGCGGGCGTGGCCCCGAATTGCCGCAACCCTTTTATGTTGTTGCCGCCAga                                                                                                           >  8:243281/1‑147 (MQ=255)                                    tCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGccc                                                                                                         >  5:318759/1‑147 (MQ=255)                                                aaTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTACCACACGTGCAGCACAGGTCTCGAACGCTGTGGCGTACCAGTGGGAGCCGGCCTGCCCGCGAAAGGCCGCAACCCGTTTATAAGGTTGCCGCCAGCCCCGCcaacaacaa                                                                                             >  6:121370/1‑147 (MQ=255)                                                aaTAAACGCGACACCTGCGTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaacaa                                                                                             <  4:387169/147‑1 (MQ=255)                                                 aTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaa                                                                                                   <  1:279331/140‑1 (MQ=255)                                                 aTAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaa                                                                                                   >  2:279331/1‑140 (MQ=255)                                                   aaaCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑gcg                                                                                         <  6:392552/147‑1 (MQ=255)                                                         gACACCGGCTTCGCGGGCACGCCGTCTCCCACCGGGGCAGCACCGGTCGCGAACGCTGGGCCGTACCGGGGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTa                                                                                   <  5:41337/147‑1 (MQ=255)                                                               tGCTTCGCGGGCACGCCCGCTCCCCCACGTGCAGCACAGGTCTCGAACGCTGGGGCGGGCCGGTGGGAGCGGGGGTGGCCGCGGATTGCCGCAACCCATTTTTGTGGTTGCCGCCCGCCCCGCCAACCACAA‑GCGCGGGGAAAGgtct                                                                            >  2:265602/1‑148 (MQ=19)                                                                 cTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGttcttc                                                                          <  8:88622/148‑1 (MQ=255)                                                                 cTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGttct                                                                            <  1:61812/146‑1 (MQ=255)                                                                   tCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCGCGAACGCTGTGCCGTACCGGTGGGAGCGGGCGTGCCCGCGAATGGCCg                                                                                                                                      >  2:271611/1‑87 (MQ=21)                                                                   tCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCCCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCg                                                                                                                                      <  1:271611/87‑1 (MQ=255)                                                                            cGCCCGCTCCCCCTGGTGCAGCACAGGTCTCTAACGCTGGGCGTTACCTGTGGGAGGGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCt                                                               <  1:423687/148‑1 (MQ=255)                                                                                cGCTCCCACAGGTGCAGCCCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAATGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCg                                                            <  1:265602/148‑1 (MQ=255)                                                                                cGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCgg                                                           >  7:244438/1‑148 (MQ=255)                                                                                cGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCACCCCCGCCAACAACAA‑GCGCTGGTAAAGTTcttctt                                                                        <  2:257474/135‑1 (MQ=255)                                                                                cGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCACCCCCGCCAACAACAA‑GCGCTGGTAAAGTTcttctt                                                                        >  1:257474/1‑135 (MQ=255)                                                                                 gCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTaaa                                                                                 >  7:172222/1‑125 (MQ=255)                                                                                 gCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTaaa                                                                                 <  8:172222/125‑1 (MQ=255)                                                                                  cTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGc                                                          >  5:326863/1‑147 (MQ=255)                                                                                      cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGttcttc                                                                          <  6:427789/127‑1 (MQ=255)                                                                                      cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGttcttc                                                                          >  5:427789/1‑127 (MQ=255)                                                                                      cacaGGTGCAGCACAGGACTCGAACGCTGTGCCGTACCTGTGTGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAC‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                        <  5:189447/145‑1 (MQ=255)                                                                                                gcaCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCAt                                            <  4:411523/147‑1 (MQ=255)                                                                                                     ggTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGcc                                       >  5:240726/1‑147 (MQ=255)                                                                                                        ctcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCa                                    <  3:406586/147‑1 (MQ=255)                                                                                                          cGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                                  >  5:120326/1‑147 (MQ=255)                                                                                                            aaCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                                 <  6:318759/146‑1 (MQ=255)                                                                                                                 tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATc                                           <  4:19164/131‑1 (MQ=255)                                                                                                                 tgtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATc                                           >  3:19164/1‑131 (MQ=255)                                                                                                                  gtgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCttt                           >  5:151018/1‑146 (MQ=255)                                                                                                                   tgCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCAt                        <  7:243281/148‑1 (MQ=255)                                                                                                                    gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCttt                           <  6:151018/144‑1 (MQ=255)                                                                                                                     ccGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                      >  7:101979/1‑148 (MQ=255)                                                                                                                        tACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                    >  6:410066/1‑147 (MQ=255)                                                                                                                                 gAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAAc                                                 <  2:269243/109‑1 (MQ=255)                                                                                                                                 gAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAAc                                                 >  1:269243/1‑109 (MQ=255)                                                                                                                                 gAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                    <  2:149902/138‑1 (MQ=255)                                                                                                                                 gAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                    >  1:149902/1‑138 (MQ=255)                                                                                                                                 gAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcc            <  6:240726/146‑1 (MQ=255)                                                                                                                                   gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCgg        <  8:320016/148‑1 (MQ=255)                                                                                                                                        cGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGc     >  4:244218/1‑146 (MQ=255)                                                                                                                                         gTGCCCGCGAATGGCCGCAACCCTTATATCTGGTTGCCGCCAGCCCCGCGAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAt   <  5:133201/147‑1 (MQ=255)                                                                                                                                          tGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                        <  4:139187/93‑1 (MQ=255)                                                                                                                                          tGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                        >  3:139187/1‑93 (MQ=255)                                                                                                                                          tGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATc  <  5:121370/147‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                GCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAA‑GCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013744‑6014027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑