| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,907,912 | Δ1 bp | 5.5% | coding (55/1095 nt) | spuE ← | spermidine/putrescine ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,907,912 | 0 | C | . | 5.5% | 295.8 / 9.5 | 91 | coding (55/1095 nt) | spuE | spermidine/putrescine ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (41/45); new base . (2/3); total (43/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.41e-01 | |||||||||||
CTTGCCTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGATGCCGCAA > NC_002947/5907766‑5908060 | cTTGCCTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGc > 7:170426/1‑147 (MQ=255)cTTGCCTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCa < 7:44997/149‑1 (MQ=255) gCCTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCg > 5:294889/1‑149 (MQ=255) cTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCTGGCATG‑CAGCGTc < 2:54197/149‑1 (MQ=255) ccAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAg < 8:13014/148‑1 (MQ=255) cAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCTGGCATG‑CAGCGTccaa < 8:55814/148‑4 (MQ=255) cAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCTGGCATG‑CAGCGTccaa < 2:111266/148‑4 (MQ=255) cAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑CCATGCGCGCGGCAGGc > 8:109515/1‑149 (MQ=255) gggTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTCATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGCACCACTTATAGAAATGCACCGTCGGCGCCCCTTGGACGCT‑GCATGCCAGCGTCAGGccc > 5:288195/1‑149 (MQ=255) gTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCgccag > 4:178632/1‑149 (MQ=255) gTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCgccag > 2:393459/1‑149 (MQ=255) gTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCgcca < 6:72034/148‑1 (MQ=255) gAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCgccagcc > 5:354261/1‑147 (MQ=255) gAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCgccagcc < 6:354261/147‑1 (MQ=255) cGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAg < 2:275726/149‑1 (MQ=255) cGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAg < 8:10467/149‑1 (MQ=255) acacATCTTGCACAGGGTTGATGCCCGTGGCTTTCTCGAAGTCCGGGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGc < 4:148305/148‑1 (MQ=255) aTCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCaa < 1:395726/141‑1 (MQ=255) aTCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCaa > 2:395726/1‑141 (MQ=255) aTCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGc < 2:19224/149‑1 (MQ=255) aTCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGc > 1:311391/1‑149 (MQ=255) aTCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGc > 4:86555/1‑149 (MQ=255) tCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCg > 3:24421/1‑149 (MQ=255) gCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCg < 6:246724/145‑1 (MQ=255) gCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGaa > 7:338880/1‑148 (MQ=255) gCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGaa < 7:176035/148‑1 (MQ=255) cacaGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAAt < 1:393459/148‑1 (MQ=255) cacaGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAAt < 6:356251/148‑1 (MQ=255) ggCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGa < 3:86555/149‑1 (MQ=255) gCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCaa < 8:363036/130‑1 (MQ=255) gCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCaa > 7:363036/1‑130 (MQ=255) ttGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAAt < 6:14209/149‑1 (MQ=255) gATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAAt < 5:41121/147‑1 (MQ=255) gATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATa < 6:294889/148‑1 (MQ=255) tGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGAc < 1:356700/149‑1 (MQ=255) tGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGAc < 6:43933/149‑1 (MQ=255) ccGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCCCTTGGACCCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAg > 2:326401/1‑149 (MQ=255) tGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgg < 1:49333/149‑1 (MQ=255) tGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgg < 8:36488/149‑1 (MQ=255) tGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgg < 4:24421/149‑1 (MQ=255) tGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgg > 4:211777/1‑149 (MQ=255) gCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgggg < 1:395478/149‑1 (MQ=255) gCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgggg < 3:178632/149‑1 (MQ=255) gCTTTCTCGAAGTACGCGAGTGTGGGGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTgggg < 7:347485/149‑1 (MQ=255) tttCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGt > 7:13237/1‑149 (MQ=255) tttCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAAGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGt > 6:173710/1‑149 (MQ=255) tctcGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTcc > 2:145458/1‑149 (MQ=255) tcGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCt > 4:159876/1‑148 (MQ=255) tcGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCt > 3:203888/1‑148 (MQ=255) gAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTca > 5:18373/1‑148 (MQ=255) gAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTc < 3:159876/147‑1 (MQ=255) aaGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATc < 5:326533/105‑1 (MQ=255) aaGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATc > 6:326533/1‑105 (MQ=255) cgcgAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCGGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCATGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAAtga < 6:288195/148‑3 (MQ=255) cgcgAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGAc > 6:362197/1‑127 (MQ=255) cgcgAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGAc < 5:362197/127‑1 (MQ=255) gcgAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGt < 3:211777/149‑1 (MQ=255) gAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGc > 1:143087/1‑149 (MQ=255) ggggCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGc < 1:326401/149‑1 (MQ=255) gggCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATAGTGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCg < 1:278054/149‑1 (MQ=255) cGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACaa > 7:20848/1‑149 (MQ=255) gATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAAt < 8:170426/149‑1 (MQ=255) gTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCATCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAAtgctgc < 5:200766/148‑1 (MQ=255) gTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAAtgctgc > 6:200766/1‑148 (MQ=255) gTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGcc > 4:19572/1‑149 (MQ=255) gTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGcc > 5:83865/1‑149 (MQ=255) tCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCg > 5:219655/1‑149 (MQ=255) gACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAACGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTCGGTAGCCACAATGCTGCCGca > 5:31453/1‑148 (MQ=255) aGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACg > 5:197993/1‑148 (MQ=255) aGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGc < 7:109515/149‑1 (MQ=255) gTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGc > 5:157615/1‑148 (MQ=255) gTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGc > 6:391732/1‑148 (MQ=255) taGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCaaaa < 8:338880/148‑1 (MQ=255) taGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAAc > 7:258488/1‑149 (MQ=255) taGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAAc > 6:359416/1‑149 (MQ=255) gAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCg < 5:250630/149‑1 (MQ=255) cACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGgcgcg > 1:341247/1‑148 (MQ=255) tCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCaactt < 1:160193/149‑1 (MQ=255) ggCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCaacttaa < 5:391732/149‑1 (MQ=255) ggCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCaactta > 6:122484/1‑148 (MQ=255) gcTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGc < 1:145458/149‑1 (MQ=255) ctgACGCTGGCATG‑CAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGc > 4:298044/3‑149 (MQ=255) gACGCTGGCATG‑CAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGTGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCtt > 1:8109/1‑149 (MQ=255) aCGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGgc < 6:98992/126‑1 (MQ=255) aCGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGgc > 5:98992/1‑126 (MQ=255) aCGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTc > 7:58204/1‑149 (MQ=255) gCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGa < 8:258488/149‑1 (MQ=255) gCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGa > 2:200180/1‑149 (MQ=255) gCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGa > 1:84576/1‑149 (MQ=255) cT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGAt < 1:200180/149‑1 (MQ=255) cATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGATGcc > 6:373530/1‑149 (MQ=255) aTGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGATGCCg < 2:311391/149‑1 (MQ=255) ccAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCCGCTTCGATGCCGCaa > 8:72226/1‑149 (MQ=255) | CTTGCCTTCCAGGGTTTCGTTGGAGTCGAACACATCTTGCACAGGCTTGATGCCCGTGGCTTTCTCGAAGTCCGCGAGTGTGGTGGGGCCGATGTAGTCGGACCAGTTATAGAAGTGCACCGTCGGCGCCGCTTGGACGCT‑GCATGCCAGCGTCAGGCCCGCGCCAGCCATCAAGGCCTTGCGGAATACAGAAATAGACAAGTGGGGGTCCTCACAATCAGTGCCTGGGTAGCGACAATGCTGCCGCACACGCAAAACCGGCGCGCAACTTAACTTCGCAGCTTCGATGCCGCAA > NC_002947/5907766‑5908060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |