| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,059,500 | Δ1 bp | 5.3% | coding (1334/1581 nt) | PP_4458 ← | opine ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,059,500 | 0 | C | . | 5.3% | 238.1 / 6.8 | 75 | coding (1334/1581 nt) | PP_4458 | opine ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (33/37); new base . (2/2); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.06e-01 | |||||||||||
CCCAGACCTGTTTCAGACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGTAAGTCGC > NC_002947/5059354‑5059645 | cccAGACCTGTTTCAGACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCg < 2:93203/149‑1 (MQ=255) cTGTTTCAGACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGACTCGACCCTGGCTTTCCGGATGGCCTCATCAGCTAATGAGCAATGTACGCAATTc > 8:338379/1‑148 (MQ=255) tttCAGACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACa < 4:109057/149‑1 (MQ=255) gACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTg > 4:92986/1‑147 (MQ=255) ccAAACAAAGGGATGGCGCATTCGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGTATCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGT‑CGAATTTCGGACATTGctca < 1:118171/149‑4 (MQ=255) ccAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGc > 4:237868/1‑149 (MQ=255) ccAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGACTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGc > 3:2381/1‑149 (MQ=255) aaacaaaGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCgg < 7:257125/149‑1 (MQ=255) gcgcATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGc < 6:275942/149‑1 (MQ=255) gcgcATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGACTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATgg < 4:2381/148‑1 (MQ=255) cgcATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCa < 2:100648/149‑1 (MQ=255) cgcATACGTCGTCGTGAAGCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCa < 4:40033/149‑1 (MQ=255) gcATACGTCGTCCTGAATCTCAACCTGCGCCTTTTTACACAAATCGAGTTGAGTATCACAGATCAGCCACGACCCTCTCTTTCCGCATGGCATCAAAAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCTCCGATGGCa > 1:107792/1‑149 (MQ=255) tcgtcgtGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGa < 3:159669/149‑1 (MQ=255) cgtcgtGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGGCT‑GCCGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGaa < 3:237098/149‑1 (MQ=255) gtcgtGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAAt > 6:67654/1‑149 (MQ=255) gtcgtGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAAt > 1:234837/1‑149 (MQ=255) gtcgtGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCAGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGaa < 3:328969/148‑1 (MQ=255) gtcgtGAATCTGAACCTCCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAAt < 3:274387/149‑1 (MQ=255) tcgtGTATCTTTACCTGCGCGTTTTTCCTCAAATCTAGTTGTGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGATTTTC‑GTCTTTGCAGCTGGTGCGGCTATGGCAGAAGCCGAATc < 2:107792/149‑1 (MQ=255) gAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAActct > 2:382109/1‑149 (MQ=255) gAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAActct > 3:211682/1‑149 (MQ=255) gAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAActct > 7:298709/1‑149 (MQ=255) aCCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGt < 3:237868/149‑1 (MQ=255) cTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCa < 7:287682/149‑1 (MQ=255) cgcCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGc < 4:211682/148‑1 (MQ=255) gcCCTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCa < 3:12149/149‑1 (MQ=255) cTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCag > 2:386261/1‑148 (MQ=255) tttCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCagtagt > 7:8898/1‑149 (MQ=255) tCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCag > 6:104643/1‑143 (MQ=255) tCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCag < 5:104643/143‑1 (MQ=255) acaAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGgcg > 3:114673/1‑149 (MQ=255) acaAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGAATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTATTCGgcg > 1:149074/1‑149 (MQ=255) acaAATAGAGTTGAGTAT‑GCGGATCAGCCTCGACCCTGGCTTTGCGGATGGCATCATCAGATACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGgcg > 2:253978/1‑149 (MQ=255) caAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGgcgc < 2:234837/149‑1 (MQ=255) ttGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATc < 3:185354/149‑1 (MQ=255) aGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGag < 3:198664/149‑1 (MQ=255) aGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGag < 8:298709/149‑1 (MQ=255) gTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGagc < 3:92986/149‑1 (MQ=255) gTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGagc < 1:382109/149‑1 (MQ=255) tCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGag > 2:250092/1‑147 (MQ=255) t‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGagcag > 6:317070/1‑148 (MQ=255) ggATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCAcc < 1:250092/149‑1 (MQ=255) gATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCg > 5:187883/1‑149 (MQ=255) tCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGt > 5:257639/1‑148 (MQ=255) gCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTaaaa > 3:237050/1‑149 (MQ=255) gCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTaaaa < 7:338379/149‑1 (MQ=255) gCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTaaaa > 7:282668/1‑149 (MQ=255) cTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAaca > 1:307989/1‑149 (MQ=255) cTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATcgc > 4:257362/1‑149 (MQ=255) tGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCgg > 7:365643/1‑118 (MQ=255) tGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCgg < 8:365643/118‑1 (MQ=255) ggCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCgcgc > 4:347329/1‑149 (MQ=255) ggCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCgcgc > 4:353010/1‑149 (MQ=255) gCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGct < 2:307989/149‑1 (MQ=255) tttCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGctct > 2:9621/1‑149 (MQ=255) gATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCtt > 1:211197/1‑149 (MQ=255) gATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGGAAAACACGATCGCGCTCTGGTCtt > 6:319939/1‑149 (MQ=255) atcatcAGCTACTGAGCAATGTCCGAATTTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGc > 1:16702/1‑149 (MQ=255) atcatcAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCgg < 1:20274/102‑1 (MQ=255) atcatcAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCgg > 2:20274/1‑102 (MQ=255) atcaGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCtt < 2:149074/148‑1 (MQ=255) aGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTg < 5:67654/148‑1 (MQ=255) aGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTg < 5:317070/148‑1 (MQ=255) gCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGc < 4:114673/149‑1 (MQ=255) gCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGc < 4:237050/149‑1 (MQ=255) tACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCt > 1:369813/1‑149 (MQ=255) cTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTg < 6:257639/148‑1 (MQ=255) cTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTg < 2:369813/148‑1 (MQ=255) gctgCAATGT‑CGAATTTCGGACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCa < 1:113652/72‑1 (MQ=25) gctgCAATGT‑CGAATTTCGGACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCa > 2:113652/4‑75 (MQ=25) gAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGt > 7:287121/1‑148 (MQ=255) tgCAATGT‑CGAATTTCGGACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGt > 7:119135/2‑147 (MQ=255) gCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGGAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGTaa < 5:319939/148‑1 (MQ=255) tGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGTAAGTcgc < 3:257362/149‑1 (MQ=255) | CCCAGACCTGTTTCAGACCAAACAAAGGGATGGCGCATACGTCGTCGTGAATCTGAACCTGCGCCTTTTTCCACAAATCGAGTTGAGTCT‑GCGGATCAGCCTCGACCCTGGCTTTCCGGATGGCATCATCAGCTACTGAGCAATGTCCGAAATTC‑GACATTGCAGCGGGTGCGCCGATGGCAGAAGCCGAATCGTAAAACTCTGTCAGCCAGTAGTCGGCGCCCGGATATCGAGCAGCACCGTAAAACACGATCGCGCTCTGGTCTTGACGGCTTTTGGCCTGGTAAGTCGC > NC_002947/5059354‑5059645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |