| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,463,407 | Δ1 bp | 6.5% | intergenic (‑58/+41) | PP_4799 ← / ← lipA | muramoyltetrapeptide carboxypeptidase/lipoyl synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,463,407 | 0 | C | . | 6.5% | 246.9 / 10.0 | 77 | intergenic (‑58/+41) | PP_4799/lipA | muramoyltetrapeptide carboxypeptidase/lipoyl synthase |
| Reads supporting (aligned to +/- strand): ref base C (32/40); new base . (3/2); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
CGCCCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAAC > NC_002947/5463265‑5463545 | cgcccgccGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCg < 2:38225/149‑1 (MQ=255) ccgccgGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGCG‑GCATCGGCa < 7:139129/149‑1 (MQ=255) ccgccgGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCa > 5:76326/1‑149 (MQ=255) ccgccgGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCAGATGC‑CGCCCTTGGGCGCGCATCGGCa > 1:77099/1‑149 (MQ=255) ggggCGACAATGGCAAAACATGCGTTGGCCGGTAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCAGTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCt‑gt < 7:283698/149‑1 (MQ=255) ggggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGCGCGCCCAAGGGcg‑gcatcggcattttt < 7:83660/149‑5 (MQ=38) ggggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCt‑gt < 1:389136/149‑1 (MQ=255) gggCGTCAATGGCAATACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGGATCt‑gtg < 2:209074/149‑1 (MQ=255) ggCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTgg > 4:314622/1‑149 (MQ=255) gACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCAt < 5:62265/134‑1 (MQ=255) gACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCAt > 6:62265/1‑134 (MQ=255) gACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTc > 5:300908/1‑149 (MQ=255) aaTGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGc > 6:225879/1‑149 (MQ=255) aaTGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGc > 7:142038/1‑149 (MQ=255) tGGCAAAACATGTGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGctc < 1:258603/149‑1 (MQ=255) tGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGctc > 5:209879/1‑149 (MQ=255) gCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTa < 6:323177/149‑1 (MQ=255) cAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAg < 2:140779/149‑1 (MQ=255) cAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAg > 3:43728/1‑149 (MQ=255) aaaaCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAgg > 8:270665/1‑149 (MQ=255) aCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTa < 6:294136/149‑1 (MQ=255) aCATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTa < 4:103755/149‑1 (MQ=255) aTGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTa > 2:329323/1‑147 (MQ=255) gTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCa > 8:62904/1‑148 (MQ=255) ttGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATa < 6:54566/149‑1 (MQ=255) ttGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATa < 8:142038/149‑1 (MQ=255) ggCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAg < 1:116408/148‑1 (MQ=255) gCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCt > 5:353871/1‑149 (MQ=255) cGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCt > 3:138448/1‑147 (MQ=255) cgcgGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCtt < 3:314622/149‑1 (MQ=255) cTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCt < 5:225879/149‑1 (MQ=255) gCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTg < 6:300908/148‑1 (MQ=255) cAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGc < 2:77099/149‑1 (MQ=255) gggggaTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCg < 4:295485/147‑1 (MQ=255) ggtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCTCGTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTg < 1:101857/149‑1 (MQ=255) ggtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTgg < 6:209879/149‑1 (MQ=255) gtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTggg > 1:273656/1‑149 (MQ=255) gtTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTggg > 2:294288/1‑149 (MQ=255) gAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCctg < 5:166629/149‑1 (MQ=255) gAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCatg > 7:306784/1‑149 (MQ=255) tgtttttGGTGAAGTACATCGCGTCTCGTTTCAGTGCATTGGAAACAATCAAAAATGCCTTTGC‑CGCCGTTGGGCGCGTATCGGCATCT‑GTGGCTCCGTTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCctgc < 1:290124/145‑1 (MQ=255) ggTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGTGCctgctg > 8:319606/1‑149 (MQ=255) ggCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTACGCTCTAGGCTAGAGCATAGATCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGc > 7:317418/1‑149 (MQ=255) cgcAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGt < 4:237865/149‑1 (MQ=255) tACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTAc > 8:321803/1‑149 (MQ=255) aCATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTAc < 5:306584/148‑1 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaa < 5:211069/149‑1 (MQ=255) aTCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACgaa < 6:42538/149‑1 (MQ=255) cTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCa < 3:51857/149‑1 (MQ=255) cTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCa > 4:51857/1‑149 (MQ=255) ccTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCAc > 2:19269/1‑148 (MQ=255) ttGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAg > 8:211491/1‑149 (MQ=255) atcgaaTTGGACACAAACAATAATGCCGATGC‑CGGCCTTGGGCGCGCATCGTCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTTGTCGGCGTGGTACGAAGGACGCACCAGCg < 3:351006/142‑1 (MQ=255) aGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCggg > 1:270383/1‑149 (MQ=255) aGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATATTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGCACGCACCAGCg > 4:351006/1‑147 (MQ=255) gcATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCa < 6:353871/149‑1 (MQ=255) cATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAg < 7:277370/149‑1 (MQ=255) ttGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGaa < 7:270665/149‑1 (MQ=255) acacAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCCCCAGCGGGCCAGAAGCaa > 7:213036/1‑149 (MQ=255) acacAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCaa < 5:366834/149‑1 (MQ=255) acaaacaaAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTg < 8:220589/97‑1 (MQ=255) acaaacaaAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTg > 7:220589/1‑97 (MQ=255) aaacaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGtt > 7:119936/1‑149 (MQ=255) aacaaaAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTc > 1:42309/1‑149 (MQ=255) aaaaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCtt > 2:146385/1‑148 (MQ=255) aaaaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTg < 7:62904/149‑1 (MQ=255) aaaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGa < 1:19269/149‑1 (MQ=255) aaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTg > 1:216802/1‑147 (MQ=255) aaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGaa < 3:297172/149‑1 (MQ=255) aaaTGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGaa < 1:146385/149‑1 (MQ=255) tgccgatgc‑cgCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGcc < 2:216802/149‑1 (MQ=255) cgatgcgcGCCCAAGGGCG‑GCATCGGCATTT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCAt > 7:277330/1‑149 (MQ=255) gatgcgcgccCAAGGGCG‑GCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACACACCAGCGGGCCAGaa < 3:331742/122‑1 (MQ=255) gatgcgcgccCAAGGGCG‑GCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACACACCAGCGGGCCAGaa > 4:331742/7‑128 (MQ=255) atgcgcgccCAAGGGCG‑GCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTTGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCt > 6:28929/6‑149 (MQ=255) tgc‑cgCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCGCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCtt < 6:76326/149‑1 (MQ=255) cgccCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTa < 2:42309/149‑1 (MQ=255) cccTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAAc > 6:301701/1‑149 (MQ=255) | CGCCCGCCGGGGCGACAATGGCAAAACATGCGTTGGCCGGCAGCGCGGCTGGCAGGGTGGGTTGGAAGGTTTTGGCGCAGTACATCGCGGCTCCTTGCAGCGCATTGGACACAAACAAAAATGCCGATGC‑CGCCCTTGGGCGCGCATCGGCATCT‑GTGGCTCCGCTCTAGGCTAGAGCATAGCTCAGAGCTTGATCTTGGCTTCGTGGGCCTGCTGGTCGGCGTGGTACGAAGAACGCACCAGCGGGCCAGAAGCAACGTTCTTGAAGCCCATCTTGTAAC > NC_002947/5463265‑5463545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |