| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 568,257:1 | +G | 7.1% | coding (1239/2835 nt) | uvrA ← | uvrABC excinuclease protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 568,257 | 1 | . | G | 7.1% | 272.6 / 15.2 | 70 | coding (1239/2835 nt) | uvrA | uvrABC excinuclease protein A |
| Reads supporting (aligned to +/- strand): ref base . (37/28); new base G (3/2); total (40/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.03e-01 | |||||||||||
AGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGCTTGACGATGTC > NC_002947/568109‑568403 | aGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGgcgc < 5:303657/149‑1 (MQ=255) gccTTCAGCATTTTTGCCGCCATTCCGCCACGCCGGCCAGTAAGGGCCAGTGCCCCAAAGTAGTGGCGGCCTTCACCGATCTGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGgc < 1:313964/147‑1 (MQ=255) cTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCT‑GCGCCGCGAGGcgcg < 3:137515/149‑1 (MQ=255) ttGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGcgcg > 7:243307/1‑148 (MQ=255) tGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTCCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTa > 6:148476/1‑149 (MQ=255) aGGATTTTTGCCGCGATTTCGCCCCGCCGGCCATTAAGGGGCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGACGCGCCT‑GCGCCGCGAGGcgcgcca < 1:304495/148‑4 (MQ=255) cGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACgg < 3:292089/148‑1 (MQ=255) gCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGtt > 3:388409/1‑149 (MQ=255) cACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCTCGGTTGc < 8:154323/149‑1 (MQ=255) ccAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAg < 2:161891/149‑1 (MQ=255) ccAGTAAGGGGCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAg < 7:134035/149‑1 (MQ=255) gTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGaa < 2:249078/149‑1 (MQ=255) gTAAGCGGCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGaa < 4:282462/149‑1 (MQ=255) tAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAAt > 5:38814/1‑149 (MQ=255) tAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAAt > 7:221455/1‑149 (MQ=255) tAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAAt > 7:48439/1‑149 (MQ=255) gggTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTg < 4:388409/149‑1 (MQ=255) gggTCAGTTGACCAAAGTAGTTCCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGACACGGTTGCGTGCCAAGGAATTTg < 5:148476/149‑1 (MQ=255) gACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGttct > 2:35696/1‑149 (MQ=255) gACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGttc < 3:56467/148‑1 (MQ=255) aCCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGttctt > 1:187423/1‑149 (MQ=255) cAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTca > 8:221581/1‑149 (MQ=255) aaaGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTcac > 2:365661/1‑149 (MQ=255) aaGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTcacg > 1:354163/1‑149 (MQ=255) aaGTAGTTGCTGGCTTCACAGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATCGAGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCAAGCTTTCGTGCAAAGGAATTTGGCCAGTTCTTcacg > 7:346362/1‑149 (MQ=255) ggCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGACAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCg > 8:82087/1‑149 (MQ=255) cTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGAt < 8:225675/149‑1 (MQ=255) cTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGAt > 5:385641/1‑149 (MQ=255) cACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTc < 2:354163/148‑1 (MQ=255) aCCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCgg > 5:280987/1‑149 (MQ=255) ccGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGt > 3:57919/1‑149 (MQ=255) cGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGc < 6:242776/139‑1 (MQ=255) cGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGc > 5:242776/1‑139 (MQ=255) aTCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTc > 1:59993/1‑149 (MQ=255) aTCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTc > 5:25636/1‑149 (MQ=255) ggCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGGCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTcgcg > 3:356465/1‑149 (MQ=255) gCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCgg > 2:296574/1‑149 (MQ=255) aaaTTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCgg > 6:180253/1‑147 (MQ=255) aaaTTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTa < 2:187423/149‑1 (MQ=255) aaTTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAg > 5:71442/1‑149 (MQ=255) ccgccgGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTCGCCGATTCGGTTTCGCGGTAGCGGCGCTCa < 1:35696/149‑1 (MQ=255) ggCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGtt < 5:180253/149‑1 (MQ=255) cAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCg < 2:59993/149‑1 (MQ=255) aGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCgg < 6:38814/149‑1 (MQ=255) ggTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGTACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGca > 1:315381/1‑149 (MQ=255) ttCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAAt > 6:198509/1‑149 (MQ=255) ttCTCGCCCACCCACACATGGCGCGCCTCGCGGAGC‑AGGCGCGTACCCCGGCAATCCGCGACCGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACTCACGGTCGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAAt > 3:298445/1‑149 (MQ=255) tctcGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAAt < 2:164876/148‑1 (MQ=255) gCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCCCGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACaa < 7:206578/143‑1 (MQ=255) gCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACaa > 8:206578/1‑143 (MQ=255) gCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCtt > 5:82715/1‑149 (MQ=255) gCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCtt > 3:72387/1‑149 (MQ=255) cccacccaCACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTc < 8:243307/149‑1 (MQ=255) acccacACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGaa > 4:387760/1‑149 (MQ=255) acccacACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGCCCGATACGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGaa > 3:312779/1‑149 (MQ=255) ccacACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCCCGGTTGCGTGCCAAGGAAGTTGCCCAGTTCTACCCGCACGGTGGCCCATTCGGTTTCCCGGTAGCGCCGCTCAAGGTTCGGCACAATCCCTGCGATCg > 5:311972/1‑149 (MQ=255) ccacACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACg > 3:350436/1‑149 (MQ=255) ccacACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAAACCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACg > 2:280730/1‑149 (MQ=255) cacacaTGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACgg < 6:280987/149‑1 (MQ=255) acacaTGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACggg > 5:59347/1‑149 (MQ=255) acaTGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTg < 1:365661/149‑1 (MQ=255) acaTGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTg > 5:289134/1‑149 (MQ=255) caTGGCGCGGCTCGCGGCGA‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGTCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGc < 8:346362/149‑1 (MQ=255) tacgcgcCT‑GCGCCGCGAGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGAt > 5:228307/3‑149 (MQ=255) tacgcgcCT‑GCGCCGCGAGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGAt > 2:99957/3‑149 (MQ=255) ggCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGAt > 8:96998/1‑149 (MQ=255) gcgcgcCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGAt < 1:296574/148‑1 (MQ=255) acgcgcCT‑GCGCCGCGAGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATc > 7:238289/2‑149 (MQ=255) gcgcCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGc < 6:385641/149‑1 (MQ=255) cTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGCTTGa < 3:387760/149‑1 (MQ=255) cggcgC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGCTTGACGAt < 6:25636/149‑1 (MQ=255) cgc‑AGGCGCGTACCCCGACAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGCTTGACGATGTc < 7:82087/149‑1 (MQ=255) | AGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGTCAGTTGACCAAAGTAGTTGCTGGCTTCACCGATCGGCAAATTGGTTACCGCCGGCAGGGTTTTCTCGCCCACCCACACATGGCGCGCCTCGCGGCGC‑AGGCGCGTACCCCGGCAATCCGGGCACGGTTGCGTGCCAAGGAATTTGGCCAGTTCTTCACGCACGGTGGCCGATTCGGTTTCGCGGTAGCGGCGCTCAAGGTTCGGCACAATGCCTTCGAACGGGTGCGATCGCTTGACGATGTC > NC_002947/568109‑568403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |