| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,460,539:1 | +A | 5.7% | coding (926/1167 nt) | algJ ← | alginate O‑acetylase AlgJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,460,539 | 1 | . | A | 5.7% | 356.0 / 13.6 | 87 | coding (926/1167 nt) | algJ | alginate O‑acetylase AlgJ |
| Reads supporting (aligned to +/- strand): ref base . (37/45); new base A (2/3); total (39/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
GTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTC > NC_002947/1460394‑1460685 | gTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTgc‑g > 6:45133/1‑147 (MQ=255) tCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCCGC‑GCAg < 2:145089/149‑1 (MQ=255) gTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAgg < 8:59168/148‑1 (MQ=255) tttttCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGc < 5:319279/149‑1 (MQ=255) tCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctg < 8:70099/148‑1 (MQ=255) cATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgc < 3:71526/148‑1 (MQ=255) aTTGGCAGATAACGTTCGGGGAATTCCCACACGACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgctg < 6:175994/149‑1 (MQ=255) aTTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCAGGCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgc < 1:107544/148‑1 (MQ=255) aTTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgctg > 5:11744/1‑149 (MQ=255) aTTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgctg < 6:170329/149‑1 (MQ=255) aTTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCctgctg < 7:93590/149‑1 (MQ=255) ggCAGATAACGTTCGGGGAATTACCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAg > 7:110882/1‑149 (MQ=255) gCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAgc > 4:253163/1‑149 (MQ=255) aGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAGGCCCTGC‑GCAgcga < 3:97062/149‑2 (MQ=255) gATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAgcgcg > 8:295713/1‑149 (MQ=255) cGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg > 8:372643/1‑149 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAGGCCCTGC‑GCAgcgacgtc < 2:260779/146‑6 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGCAGCAGGCCCTGC‑GCAgcgacgtc > 1:260779/1‑141 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg > 6:333959/1‑148 (MQ=255) gTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAg > 6:255014/1‑148 (MQ=255) ggggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAg < 8:94456/148‑1 (MQ=255) ggggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGt > 8:44671/1‑149 (MQ=255) gggAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGtt > 8:343572/1‑149 (MQ=255) aaTTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCa < 7:343572/149‑1 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCg > 7:352963/1‑149 (MQ=255) ccACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCg > 6:199113/1‑149 (MQ=255) cacaCCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCgg < 6:11744/149‑1 (MQ=255) acacCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCggg > 6:133734/1‑149 (MQ=255) accaccacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGtt > 8:81767/1‑149 (MQ=255) ccaccacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTg < 1:17758/149‑1 (MQ=255) accacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGCGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGgc > 3:68028/1‑149 (MQ=255) ccacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGgcg < 7:70793/149‑1 (MQ=255) cacTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGgcgc > 5:225734/1‑149 (MQ=255) gtgCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCt < 4:215496/148‑1 (MQ=255) gggcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTg < 5:152174/147‑1 (MQ=255) gcggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGt < 7:81767/149‑1 (MQ=255) ggcgTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGc < 5:246782/149‑1 (MQ=255) ttCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGAGGGTTGGCGCTGTAGCTGGTGCCTAc > 8:158866/1‑149 (MQ=255) ttCTTGAAGGCATCGCTTTGCAGGTACTTGAGCAGCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTAc < 8:266596/149‑1 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCa < 3:253163/146‑1 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCa < 1:90883/146‑1 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGt < 5:132132/148‑1 (MQ=255) gAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGt < 4:65305/148‑1 (MQ=255) gAAGGCATCGCTTTCCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGACTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTg > 8:224765/1‑149 (MQ=255) aaGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGTCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTg < 7:372643/148‑1 (MQ=255) aaGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGc < 7:199972/149‑1 (MQ=255) gCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTg > 5:110437/1‑132 (MQ=255) gCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTg < 6:110437/132‑1 (MQ=255) cATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAAc < 8:263781/148‑1 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAAccc > 1:338641/1‑148 (MQ=255) aTCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg > 3:79314/1‑149 (MQ=255) cAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 4:79314/148‑1 (MQ=255) cAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 5:45133/148‑1 (MQ=255) cAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 7:44671/148‑1 (MQ=255) cAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGc < 6:225734/148‑1 (MQ=255) aGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCtt < 8:2070/149‑1 (MQ=255) aGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCtt > 2:342494/1‑149 (MQ=255) ggTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTg < 7:295713/149‑1 (MQ=255) cTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCgg > 4:118022/1‑149 (MQ=255) ttGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGc > 2:247704/1‑149 (MQ=255) cATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg > 8:7288/1‑128 (MQ=255) cATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg < 7:7288/128‑1 (MQ=255) ggCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcgc > 7:43457/1‑149 (MQ=255) ggCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcgc > 6:383882/1‑149 (MQ=255) ggCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAAcgc < 8:352963/149‑1 (MQ=255) gcGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCg < 5:383882/149‑1 (MQ=255) gggCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGc < 4:248546/149‑1 (MQ=255) gCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg < 8:253831/113‑1 (MQ=255) gCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCg > 7:253831/1‑113 (MQ=255) ggCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTGCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCAccc > 6:276687/1‑149 (MQ=255) ggCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCAccc > 8:54893/1‑149 (MQ=255) ccGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTc < 7:71476/149‑1 (MQ=255) cGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCg < 2:271542/149‑1 (MQ=255) ttCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCAt > 4:177849/1‑149 (MQ=255) ttCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCAt > 1:210521/1‑149 (MQ=255) gTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCTAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggc < 7:158866/148‑1 (MQ=255) ggCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccgg < 2:210521/148‑1 (MQ=255) ggCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggccgg < 5:199113/148‑1 (MQ=255) ggCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCggg > 8:111653/1‑149 (MQ=255) ggCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCggg > 6:37344/1‑149 (MQ=255) gACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggc > 5:179353/1‑142 (MQ=255) gACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGAccggc < 6:179353/142‑1 (MQ=255) gACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGggtgg > 7:224045/1‑149 (MQ=255) gTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGc > 3:166836/1‑149 (MQ=255) cGCTGCAGCAGGCCCTGC‑GCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGaacaa > 8:304043/1‑103 (MQ=255) cGCTGCAGCAGGCCCTGC‑GCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGaacaa < 7:304043/103‑1 (MQ=255) cTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGGAAGCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCAGCGACCGGCCGGGTGGTGCGttt < 8:110882/149‑1 (MQ=255) tGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCAGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTc > 8:164733/1‑149 (MQ=255) | GTCGTTTTTCATTGGCAGATAACGTTCGGGGAATTCCCACACCACCACTTGTGGTGCGGCGTTCTTGAAGGCATCGCTTTGCAGGTACTTGAGCATCGGCA‑GCAGCGGGCCATGGCCGTCTTCGGCGTAGTTGGCGACGTCGCTGC‑GCAGGGCCTGCTGCAGCGCGCCAAGGAAGTTCCAGTGCGGGTTGGCGCTGTAGCTGGTGCCTACCAGTGCAACCGGGATCTGCTTGTCGGCGAACAACGCGTCGCCGGCGTCACCCTCGGCATCGACCGGCCGGGTGGTGCGTTTC > NC_002947/1460394‑1460685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |