New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	35503 =	72 (1.130)	4 (0.070)	4/254	NT	5.6%	coding (125/588 nt)	PP_0031	hypothetical protein
	?	NC_002947	35545 =	66 (1.090)					coding (83/588 nt)	PP_0031	hypothetical protein

GTTGTTGGCCGCCCTAGGAGATAGCCATGAATGACATAGAGCCCTGGGCAGTTGCTATCGGTGACTTTCGCCGCTGCACTGAAAAACTCACTGTCCAGCTCGATGAGCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/35653‑35503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggtcAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAACAACGCCGCGCTGAATTAACGCGCTAGATATCAAAATTGTAA  >  NC_002947/35545‑35691                                                                                                                                                                                                                                                                                                            GTTGTTGGCCGCCCTAGGAGATAGCCATGAATGACATAGAGCCCTGGGCAGTTGCTATCGGTGACTTTCGCCGCTGCACTGAAAAACTCACTGTCCAGCTCGATGAGCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGG                                                                                                                                                       <  1:108432/149‑1    GTTGGCCGCCCTAGGAGATAGCCATGAATGACATAGAGCCCTGGGCAGTTGCTATCGGTGACTTTCGCCGCTGCACTGAAAAACTCACTGTCCAGCTCGATGAGCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTC                                                                                                                                                     >  4:182613/1‑148                                                                                                           GCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATCGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCC                                              >  1:156489/1‑148                                                                                                            CTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAA                                            >  4:275109/1‑149                                                                                                              GACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATC                                                           <  5:203316/132‑1                                                                                                              GACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATC                                                           >  6:203316/1‑132                                                                                                                                                    GGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGTCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAACAACGCCGCGCTGAATTAACGCGCTAGATATCAAAATTGT    <  5:257620/149‑1                                                                                                                                                    GGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAACAACGCCGCGCTGAATTAACGCGCTAGATATCAAAATTGT    <  5:257615/149‑1                                                                                                                                                      TCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAACAACGCCGCGCTGAATTAACGCGCTAGATATCAAAATTGTAA  <  6:14459/149‑1                                                                                                                                                                                                                                                                                                            GTTGTTGGCCGCCCTAGGAGATAGCCATGAATGACATAGAGCCCTGGGCAGTTGCTATCGGTGACTTTCGCCGCTGCACTGAAAAACTCACTGTCCAGCTCGATGAGCTGACCTCGCAGACGCGCACCTCCAGCGCTGTTCTGGAGAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/35653‑35503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggtcAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGCCAACAACGCCGCGCTGAATTAACGCGCTAGATATCAAAATTGTAA  >  NC_002947/35545‑35691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.