New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 261581	56 (0.880)	4 (0.070)	4/254	NT	6.1%	coding (63/966 nt)	PP_0210	phycobiliprotein
	?	NC_002947	= 261613	69 (1.140)					coding (95/966 nt)	PP_0210	phycobiliprotein

CTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/261433‑261581 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAG  <  NC_002947/261613‑261466                                                                                                                                                                                                                                                                                                           CTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAG                                                                                                                                                       <  2:29189/148‑1  TGCGCCACGAGCAACGCCGCGAACTGCCGCGACACACTCCGCTCGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTAAGACTCACCGAACGACCGACAACCCCCCGAATCTTGCCCTGTAACCACGCCTTGATGCCAGC                                                                                                                                                      >  6:225764/1‑148                                      CTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGG                                                                                                                 <  5:154686/149‑1                                           CTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCA                                                                                                            <  6:40519/149‑1                                                                       CGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCAT                                                                                                              >  7:268367/1‑119                                                                       CGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCAT                                                                                                              <  8:268367/119‑1                                                                                                                                                GCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGA       <  5:213525/149‑1                                                                                                                                                GCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGA       <  6:131428/149‑1                                                                                                                                                GCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGA       <  8:282636/149‑1                                                                                                                                                GCCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCG         >  1:193803/1‑147                                                                                                                                                 CCAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAG      >  7:186427/1‑149                                                                                                                                                  CAGCTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGT     <  5:245047/149‑1                                                                                                                                                     CTCGCTCAGGGCGATGCTGCGCTCGCCAGCGTCGCTGGCATCAAGGCGCGGTAACTGGGCATGTATGTCGGGGTTGTGGGTCGTTCTGTCAGTCTTAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGTGCCAGCGGAGTCAG  <  4:81921/149‑1                                                                                                                                                                                                                                                                                                           CTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/261433‑261581 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcTCGATCAGGGCGATGCGGCGCACGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAG  <  NC_002947/261613‑261466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.