New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 352291	55 (0.870)	4 (0.070)	4/254	NT	6.6%	coding (29/771 nt)	hisF	imidazole glycerol phosphate synthase subunit HisF
	?	NC_002947	= 352318	60 (0.990)					coding (56/771 nt)	hisF	imidazole glycerol phosphate synthase subunit HisF

CCTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/352138‑352291 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttgACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCTTCGTAGATGGCACGGCCGGTGAT  <  NC_002947/352318‑352175                                                                                                                                                                                                                                                                                                            CCTGCTGGACGCCAAGGCGCCGGGCATCATCGGCGGCATGTCCGGCGGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCGAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATC                                                                                                                                                       <  1:365210/149‑1     CTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTT                                                                                                                                                   <  7:80943/149‑1                                         ACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGA                                                                                                                >  4:130376/1‑148                                             GCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATG                                                                                                           <  3:130376/149‑1                                                     ATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGAT                                                                                                               >  1:350839/1‑137                                                     ATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGAT                                                                                                               <  2:350839/137‑1                                                                                                                                                      CCTTGACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCTTCGTAGATGGCACGGCCGGTGAT  >  7:372550/1‑149                                                                                                                                                                                                                                                                                                            CCTGCTGGACGCCAAGGCCCCGGGCATCATCGGCGCCATCACCGGCCGTGCCATCTACGAAGGCACCCTGGATGTCGCTGAGGCCCAGGCCTTCTGTGACAACTACCAAGGCTGAGGACTGAACCATGGCACTGGCCAAGCGCATTATCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/352138‑352291 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttgACCACCCGGCCGTTGTCCACGTCCAGGCAAGGGATAATGCGCTTGGCCAGTGCCATGGTTCAGTCCTCAGCCTTGGTAGTTGTCACAGAAGGCCTGGGCCTCAGCGACATCCAGGGTGCCTTCGTAGATGGCACGGCCGGTGAT  <  NC_002947/352318‑352175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.