| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 379770 = | 63 (0.990) | 6 (0.100) | 6/254 | NT | 9.9% | coding (67/1107 nt) | gbcB | glycine‑betaine dioxygenase subunit |
| ? | NC_002947 | 379814 = | 49 (0.810) | coding (111/1107 nt) | gbcB | glycine‑betaine dioxygenase subunit | |||||
GATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/379922‑379770‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGA > NC_002947/379814‑379956 GATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGC > 1:346213/1‑149GATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTCCCCTGGCTTGAAGAAGAACATCATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCCGGTCTCCTGGATGACCTAGACGCAGC > 5:180453/1‑149 GTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC < 5:222571/149‑1 GTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCAAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCA > 7:118844/1‑148 TGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC > 3:58415/1‑148 GAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTG > 7:14465/1‑139 GAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTG < 8:14465/139‑1 AAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAG > 1:256236/1‑127 AAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGATCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAG < 2:256236/127‑1 TGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACAC > 6:139616/1‑148 GATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTG < 5:139616/148‑1 CGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGA > 7:108071/1‑148 GATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/379922‑379770‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGA > NC_002947/379814‑379956 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |