New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 409939 = | 70 (1.100) | 6 (0.100) | 6/250 | NT | 9.8% | coding (725/2646 nt) | aceE | pyruvate dehydrogenase E1 component |
? | NC_002947 | 410027 = | 45 (0.750) | coding (637/2646 nt) | aceE | pyruvate dehydrogenase E1 component |
TCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/410029‑409939 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccgGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGCC > NC_002947/410027‑410168 TCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGAT > 5:41256/1‑149 CCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGGGCAATCGCCCGGGCCGGCCGGGCTGAAGCCACGGGCTTCCAGGGACGTCATGGAGCGTGCCTGGTAGATAGCCTGGATCG > 8:273304/1‑149 GGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGG > 8:164374/1‑149 ATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACT < 7:164374/149‑1 CGGAATCCCTGGGTGCACTCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGG < 7:273304/149‑1 TGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAA < 6:41256/149‑1 GCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGC > 5:200036/1‑149 GCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGC > 7:11427/1‑149 CCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGCC < 8:11427/149‑1 TCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/410029‑409939 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccgGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGCC > NC_002947/410027‑410168 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |