| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 615051 = | 84 (1.320) | 5 (0.080) | 3/254 | NT | 5.8% | coding (196/888 nt) | ispA | farnesyl diphosphate synthase |
| ? | NC_002947 | 615099 = | 83 (1.370) | coding (148/888 nt) | ispA | farnesyl diphosphate synthase | |||||
CAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/615203‑615051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccaGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCA > NC_002947/615099‑615245 CAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAG < 5:198969/149‑1 CCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCC > 4:295646/1‑148 CGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACA < 1:222555/121‑1 CGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACA > 2:222555/1‑121 GTTGCTGGCCTACGCGGCCTGCGATGCCTTGGGCGCCCCGGCCGAACAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTT > 4:379744/1‑149 GTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGACCAGCGGTT > 4:309502/1‑149 GTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTT > 6:188017/1‑149 CTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAG > 6:297970/1‑149 CGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGT < 3:309502/149‑1 CAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGTAAATCA > 6:394976/1‑149 CAGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCA > 5:186333/1‑149 CAGCCCTCGAACCGCTGTTCATCGCCCCGAGCAAAGAGCTGGAACGCCTTTACGCCGCCATGCGCTACAGCGTGATGAACGGCGGCAAACGCGTGCGCCCGTTGCTGGCCTACGCGGCCTGCGAAGCCTTGGGCGCCCCGGCCGAACAGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/615203‑615051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccaGCAACGGGCGCACGCGTTTGCCGCCGTTCATCACGCTGTAGCGCATGGCGGCGTAAAGGCGTTCCAGCTCTTTGCTCGGGGCGATGAACAGCGGTTCGAGGGCTGCGTCGACGCGCGCCTGGCAACTGGCCTGGTAGGTGCCAATCA > NC_002947/615099‑615245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |