| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 780009 = | 58 (0.910) | 4 (0.070) | 3/248 | NT | 6.8% | coding (462/954 nt) | PP_0670 | bile acid/Na+ symporter family transporter |
| ? | NC_002947 | 780052 = | 56 (0.950) | coding (419/954 nt) | PP_0670 | bile acid/Na+ symporter family transporter | |||||
CTGGTGCTGCTTACGCCCTGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/780164‑780009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcagcACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGATGCAGGGCGTAAGCAGCACCAGCAAGGCCCCGACGAGGATCGCCGGGTGTTCCAC > NC_002947/780052‑780197 CTGGTGCTGCTTACGCCCTGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAA‑CCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGC < 3:286934/149‑1 GTGCTGCTTACGCCCTGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAG > 3:298183/1‑149 GCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGAGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTAGCCTTTGCCAATGTGTGTGAACAACACAACGTAGTCGATGCAGGGCGTAAcc > 4:214365/1‑146 CTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGATGCAGGGC > 7:23869/1‑141 CTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGAGAACACCACCACGTAGTCGATGCAGGGC < 8:23869/141‑1 ttTACCTTGCCCTGATGCTGGGTGGCAGCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGATTCAGGGCGTAAGCAGCACCAGCAtg < 3:214365/147‑3 GCAGCACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTACCAATGTGGGTGAACACCACCACGTAGTCGATGCAGGGCGTAAGCAGCACCAGCAAGGCCCCGACGAGGATCGCCGGGTGTTCC < 3:237426/149‑1 GCACAAGTTGCGCCAGAAATAACAGCGGGGTTGCGGACAGGGTCAGGCGTGAGTCCACTTTGCCAATGTGGGTGAACACCACCACGTAGTCGATGCAGGGCGTAAGCTACACCAGCAAGGCCCAGACGAGGATCGACGGGTGTTCCAC > 5:336312/1‑148 CTGGTGCTGCTTACGCCCTGCATCGACTACGTGGTGGTGTTCACCCACATTGGCAAAGGCGACTCACGCCTGACCCTGTCCGCAACCCCCCTGTTATTGCTGGCGCAACTGGTGCTGCTGCCGGTGTACCTGGCCCTGATGCTGGGTGGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/780164‑780009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcagcACCAGTTGCGCCAGCAATAACAGGGGGGTTGCGGACAGGGTCAGGCGTGAGTCGCCTTTGCCAATGTGGGTGAACACCACCACGTAGTCGATGCAGGGCGTAAGCAGCACCAGCAAGGCCCCGACGAGGATCGCCGGGTGTTCCAC > NC_002947/780052‑780197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |