New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	809179 =	65 (1.020)	4 (0.070)	4/254	NT	6.2%	coding (179/1335 nt)	PP_0695	hypothetical protein
	?	NC_002947	809261 =	58 (0.960)					coding (97/1335 nt)	PP_0695	hypothetical protein

TTGGCAACGAGTCGAAGCCAATGATCGAACCCAAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/809332‑809179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCAT  >  NC_002947/809261‑809404                                                                                                                                                                                                                                                                                                            TTGGCAACGAGTCGAAGCCAATGATCGAACCCAAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAG                                                                                                                                                       >  1:176236/1‑149      AACGAGTCGAAGCCAATGATCGAACCCCAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGAACCCTACGCCTGGTCGAACTGCGCCAGCAAGTGGCCCGCCCGCAGCTCG                                                                                                                                                   >  6:265575/1‑148      AACGAGTCGAAGCCAATGATCGAACCCAAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCG                                                                                                                                                   >  1:259410/1‑148      AACGAGTCGAAGCCAATGATCGAACCCAAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCG                                                                                                                                                   >  6:265573/1‑148                                                                   CCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGA                                                                                     >  2:72091/1‑149                                                                            AGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGC                                                                             >  1:231261/1‑148                                                                                                               AGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGG                                         <  2:231261/149‑1                                                                                                                        GAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTT                                 <  1:72091/148‑1                                                                                                                                                      CTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGGTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCAT  <  6:213222/149‑1                                                                                                                                                      CTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATAATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCAT  >  5:356061/1‑149                                                                                                                                                                                                                                                                                                            TTGGCAACGAGTCGAAGCCAATGATCGAACCCAAGCGCGTCCTGCGCGCCCTAGCCGAACACTGGGCCCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/809332‑809179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCAT  >  NC_002947/809261‑809404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.