New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	811533 =	50 (0.790)	3 (0.050)	3/252	NT	5.9%	coding (719/918 nt)	PP_0698	LysR family transcriptional regulator
	?	NC_002947	811610 =	49 (0.810)					coding (642/918 nt)	PP_0698	LysR family transcriptional regulator

CTGCCTGGCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/811686‑811533 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacagGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGG  >  NC_002947/811610‑811757                                                                                                                                                                                                                                                                                                                CTGCCTGGCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTC                                                                                                                                                           <  7:69861/149‑1    CCTGGCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGAC                                                                                                                                                        <  2:99119/149‑1    CCTGGCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGA                                                                                                                                                         <  2:220276/148‑1        GCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAG                                                                                                                                                      <  4:64119/147‑1                                                                 CGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAGGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCA                                                                                           >  8:177519/1‑149                                                                            ACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAGGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGC                                                                                >  7:325795/1‑149                                                                                                                  GCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAGGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTT                                           <  7:177519/148‑1                                                                                                                                                    TCGACAGGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGG                   <  5:168812/138‑1                                                                                                                                                    TCGACAGGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGG                   >  6:168812/1‑138                                                                                                                                                          GGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGG  <  2:122876/149‑1                                                                                                                                                                                                                                                                                                                CTGCCTGGCCCACCTGGCTGCGCCTGAGCGGCCAACAGGCGCGGCACTGCGAACGCAGCGACTACGAACATTTCTACCTGTCGATTCAGGCCGCCAGCGCCGGACTGGGCCTGGCCATTGCCTCAGCCCTGATGGTGCGCGACGAACTCGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/811686‑811533 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacagGTAGAAATGTTCGTAGTCGCTGCGTTCGCAGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGG  >  NC_002947/811610‑811757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.