| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 945385 | 53 (0.830) | 3 (0.050) | 3/248 | NT | 5.2% | coding (237/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | = 945422 | 61 (1.030) | coding (200/18933 nt) | PP_0806 | surface adhesion protein | |||||
CAGCAGGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/945229‑945385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgccgTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGGTACTG < NC_002947/945422‑945276 CAGCAGGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGT > 7:51662/1‑149CAGCAGGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACAGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGT < 5:333412/149‑1 AGGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAATGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTC < 6:379198/149‑1 GGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCG > 3:349223/1‑149 GCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGC > 8:129448/1‑149 CGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGCCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAG < 4:228054/149‑1 GTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGCCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGAC < 1:104781/136‑1 GTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGCCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGAC > 2:104781/1‑136 TTCGCCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGG > 8:220190/1‑149 GCCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGGTA < 2:107567/148‑1 CCGTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGGTACT > 2:123990/1‑149 GTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGGTACTG > 2:301044/1‑148 CAGCAGGCTGAGCCCGGCAATCGCCCAAGTTGGCATGGCACTGCCTGCAGTACCGATGCCTGCGACCAGTTCGTCCAGCGAGGCCACTTCTTCGAAGGTGAAACCGGTGAACGCTGCCGCATCGTACTGGGCATGCCACAGGGTGCCGTCTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/945229‑945385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgccgTGGACCAGGCCGGGGTCGGCAGCGATATGGTCTTCGTCGGCGAAGACGGCACCCTGTGGCATGCCCAGTACGATGCGGCAGCGTTCACCGGTTTCACCTTCGAAGAAGTGGCCTCGCTGGACGAACTGGTCGCAGGCATCGGTACTG < NC_002947/945422‑945276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |