New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1044511 =	53 (0.830)	6 (0.100)	5/250	NT	10.5%	coding (219/702 nt)	PP_0904	protein InaA
	?	NC_002947	1044561 =	53 (0.890)					coding (269/702 nt)	PP_0904	protein InaA

CACCTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1044665‑1044511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcgTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGCATGAGCGCATGCTCA  >  NC_002947/1044561‑1044707                                                                                                                                                                                                                                                                                                                CACCTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGC                                                                                                                                                           <  5:111201/149‑1    CTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCATCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCA                                                                                                                                                        <  4:337060/149‑1    CTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCA                                                                                                                                                        >  8:306979/1‑149    CTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCA                                                                                                                                                        >  1:224465/1‑149    CTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCA                                                                                                                                                        >  5:166411/1‑149    CTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCA                                                                                                                                                        >  1:135834/1‑149     TTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCAT                                                                                                                                                       >  2:258205/1‑149       CGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATC                                                                                                                                                      <  6:166411/148‑1                                                                                                     GAAGACGATGCGCGGTACTCGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCA                                                       >  2:63637/1‑149                                                                                                        GACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGC                                                    >  4:210329/1‑149                                                                                                        GACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGC                                                    >  7:277032/1‑149                                                                                                            ATGCGCGGTACTCGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAA                                                <  1:63637/149‑1                                                                                                                      CACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGC                                       <  3:210329/148‑1                                                                                                                                           AACTGTTCAGCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGC                 <  8:277032/149‑1                                                                                                                                                    GCGCATCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGCATGAGCGCA        >  1:171245/1‑149                                                                                                                                                         TCGTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGCATGAGCGCATGCT    >  7:320550/1‑148                                                                                                                                                           GTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGCATGAGCGCATGCTCA  <  2:335387/148‑1                                                                                                                                                                                                                                                                                                                CACCTTCGGCATGCCAGGTGTCGAGTTCGACAAAACCGTCCAGCGCTTCGCTGACCAGCAGCGCGCGCCACTGGTGCTCGGCATCGCGCTGCGCGCCACAGAAGACGATGCGCGGTACACGCACGCCCAACTGCTCGAAACTGTTCAGCGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1044665‑1044511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcgTCTTCTGTGGCGCGCAGCGCGATGCCGAGCACCAGTGGCGCGCGCTGCTGGTCAGCGAAGCGCTGGACGGTTTTGTCGAACTCGACACCTGGCATGCCGAAGGTGCCCGCGAGCGTTACCCGCAAGTGGTGCATGAGCGCATGCTCA  >  NC_002947/1044561‑1044707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.