New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1143023 = | 55 (0.870) | 3 (0.050) | 3/252 | NT | 5.3% | coding (159/1428 nt) | arcD‑II | arginine/ornithine antiporter |
? | NC_002947 | 1143060 = | 55 (0.910) | coding (196/1428 nt) | arcD‑II | arginine/ornithine antiporter |
GCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTCGCCAAAGCCGGCCTTGGCGTAGGCATATACCCCCGAGTCCAGTTCCGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1143176‑1143023 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaacCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAACGTCGGCTATTTCGTGCTGCTGTTCAGCACCCTGGG > NC_002947/1143060‑1143205 GCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTCGCCAAAGCCGGCCTTGGCGTAGGCATATACCCCCGAGTCCAGTTCCGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGG < 2:88708/148‑1 GACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTCGCCAAAGCCGGCCTTGGCGTAGGCATATACCCCCGAGTCCAGTTCCGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCA < 2:340250/149‑1 CGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCAACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAA > 8:363447/1‑149 TTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCAACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTA > 7:184033/1‑122 TTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCAACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTA < 8:184033/122‑1 CCAACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAACGTCGGCTATTTCGTGCTGCTGTTCAGCACCCTG < 6:121772/149‑1 CAACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAACGTCGGCTATTTCGTGCTGCTGTTCAGCACCCAGG > 1:360842/1‑149 AACCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAACGTCGGCTATTTCGTGCTGCTGTTCAGCACCCTGGG < 1:340250/149‑1 GCCGACGTTGCCCAGCCAGGCGCTGATCCAGTAGCCCCAGGCCGAGGAAAAGCCCATGTACTCGCCAAAGCCGGCCTTGGCGTAGGCATATACCCCCGAGTCCAGTTCCGGCTTGCGGTTGGCCAGGGTCTGGAACACGAAGGCCAGGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1143176‑1143023 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaacCGCAAGCCGGAACTGGACTCGGGGGTATATGCCTACGCCAAGGCCGGCTTTGGCGAGTACATGGGCTTTTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGGCTGGGCAACGTCGGCTATTTCGTGCTGCTGTTCAGCACCCTGGG > NC_002947/1143060‑1143205 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |