| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1256771 = | 66 (1.040) | 4 (0.070) | 4/254 | NT | 5.9% | intergenic (+18/+93) | mrp/PP_mr14 | ATP‑dependent Fe‑S cluster transferase/cspA regulatory region |
| ? | NC_002947 | 1256829 = | 64 (1.060) | intergenic (+76/+35) | mrp/PP_mr14 | ATP‑dependent Fe‑S cluster transferase/cspA regulatory region | |||||
CTAAGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1256924‑1256771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGAAGCTAGATCGACTTAG > NC_002947/1256829‑1256924 CTAAGTCGATCTAGCTTCCTAGCTTTCAAGAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTG > 5:122674/1‑149CTAAGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTG > 7:174948/1‑149 TAAGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGC > 7:159686/1‑149 AGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGG < 4:289817/149‑1 AGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGG < 7:155686/149‑1 GTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGG > 6:232155/1‑149 GTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTACTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGGGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTCCGGCGCAGTCGCGGTGTGCGGG > 2:49293/1‑149 GCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGCGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGACGCTAGATCGA > 8:311357/1‑149 CCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGCGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGAAGCTAGATCGAC > 7:115773/1‑149 CCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGCGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGAAGCTAGATCGACT > 2:354191/1‑149 CTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGCGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGAAGCTAGATCGACTTAG < 8:115773/149‑1 CTAAGTCGATCTAGCTTCCTAGCTTTCAAAAAAACCCGCCTTCTGGCGGGTTTTTTTATGCCTGCTCGAAATAGGCGCTGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGGACTGCACAGGCTTCAAGTACGGCGCAGTCGCTGTGTGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1256924‑1256771‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcGAGCCCGCGAAGAGGCCAGCGCCTATTTCGAGCAGGCATAAAAAAACCCGCCAGAAGGCGGGTTTTTTTGAAAGCTAGGAAGCTAGATCGACTTAG > NC_002947/1256829‑1256924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |