| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1297498 | NA (NA) | 3 (0.050) | 3/258 | NT | NA | coding (686/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1297525 | NA (NA) | coding (713/1329 nt) | PP_1133 | transposase | |||||
AAGATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1297347‑1297498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTCC < NC_002947/1297525‑1297379 AAGATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGA < 5:177668/149‑1 AGATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAA < 6:96113/149‑1 AGATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGCCGGCGCGAGCATTTGCATGCGCTAACTCAGGAA > 3:138846/1‑149 GATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAAT < 5:187912/149‑1 GATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAAT > 5:308568/1‑149 ATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATT > 2:391597/1‑149 ATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATT < 6:333862/149‑1 TTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATT < 3:269152/148‑1 GTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAATGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGA < 7:209934/149‑1 GCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTA > 3:300021/1‑128 GCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTA < 4:300021/128‑1 AATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGGCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGT > 1:315820/1‑149 AATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGT > 2:22792/1‑149 AATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGG < 7:36810/148‑1 ATTTGCTGCTCCAGGAAGTCATAGGCATCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTC < 4:219481/149‑1 ATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTTAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTC < 2:320495/149‑1 ATTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTC > 3:247182/1‑149 TTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTCC > 6:144048/1‑149 TTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTCC > 7:186328/1‑149 TTTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTCC < 8:92455/149‑1 AAGATTTTGCGGGCCATCTGCGCAGGTGAACGGGACCCAGTGCAACTGGCTGAACTAACCGACCGCCGCATCAAGGCAGGCAAGGAGGCTGTCGCTCGGAGTCTTCATGGCAATTGGCGGCGCGAGCATTTGCATGCGCTAACTCAGGAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1297347‑1297498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattTGCTGCTCCAGGAAGTCATAGGCAGCCAATTCCTGAGTTAGCGCATGCAAATGCTCGCGCCGCCAATTGCCATGAAGACTCCGAGCGACAGCCTCCTTGCCTGCCTTGATGCGGCGGTCGGTTAGTTCAGCCAGTTGCACTGGGTCC < NC_002947/1297525‑1297379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |