| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1330937 = | NA (NA) | 4 (0.070) | 3/256 | NT | NA | coding (162/1644 nt) | PP_1157 | acetolactate synthase |
| ? | NC_002947 | 1330981 = | NA (NA) | coding (206/1644 nt) | PP_1157 | acetolactate synthase | |||||
GACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1331089‑1330937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > NC_002947/1330981‑1331128 GACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGC < 8:156550/149‑1 CTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCAGCCCAGGAAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAG > 6:297353/1‑149 TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGC > 8:50438/1‑149 TTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCA > 8:329229/1‑135 TTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCA < 7:329229/135‑1 CGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCATGCGACCGTAGGTGGCAG < 3:197192/129‑1 CGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCATGCGACCGTAGGTGGCAG > 4:197192/1‑129 GGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCC > 1:159931/1‑149 ACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATC > 8:361477/1‑148 ACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATC > 3:14480/1‑148 CAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATC > 2:336138/1‑147 GCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGC < 8:18657/149‑1 GCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGC < 6:175045/149‑1 GCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGG > 1:312295/1‑148 CCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATT > 4:344052/1‑136 CCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATT < 3:344052/136‑1 CTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > 5:318531/1‑149 CTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > 2:224706/1‑149 CTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > 1:50270/1‑149 CTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGAGGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > 3:5564/1‑149 GACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1331089‑1330937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCAT > NC_002947/1330981‑1331128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |