| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1330994 | NA (NA) | 4 (0.060) | 4/260 | NT | NA | coding (219/1644 nt) | PP_1157 | acetolactate synthase |
| ? | NC_002947 | = 1331024 | NA (NA) | coding (249/1644 nt) | PP_1157 | acetolactate synthase | |||||
CCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1330845‑1330994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCAGTACCAGCTTGATCTTCGACTTGCGCAG < NC_002947/1331024‑1330878 CCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCG < 1:16431/148‑1CCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCG < 5:216438/148‑1 CTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCG > 5:327893/1‑124 CTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCG < 6:327893/124‑1 CCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGCCCTGGCGGTCACCAGGTTGGTGGCACCAGGG < 5:54172/149‑1 CAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGG < 2:224225/149‑1 TGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAG < 7:105250/91‑1 TGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAG > 8:105250/1‑91 GGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCCGTACCAGCTTGATCTTCGACTTGCGC < 1:10729/148‑1 GGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCAGTACCAGCTTGATCTTCGACTTGCGC < 6:226054/148‑1 GCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCAGTACCAGCTTGATCTTCGACTTGCGCAG > 3:80982/1‑149 GCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCAGTACCAGCTTGATCTTCGACTTGCGCAG < 4:355436/149‑1 CCCGGTGAGGAAAACCTCGACCTGCTCGAATCCCTGCGCAAGTCGAAGATCAAGCTGGTACTGACCCGTCACGAGCAGTCCGCAGGTTTCATGGCTGCCACCTACGGTCGCCTGACCGGCAAGACCGGCGTCAGCCTGTCGACCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1330845‑1330994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCATGAAACCTGCGGACTGCTCGTGACGGGTCAGTACCAGCTTGATCTTCGACTTGCGCAG < NC_002947/1331024‑1330878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |