| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1557369 | 67 (1.050) | 4 (0.070) | 3/254 | NT | 5.6% | coding (804/993 nt) | PP_1368 | glycosyltransferase domain‑containing protein |
| ? | NC_002947 | = 1557391 | 71 (1.170) | coding (782/993 nt) | PP_1368 | glycosyltransferase domain‑containing protein | |||||
TCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1557219‑1557369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgGCCAATTCAGTCTGCTGCCTGGCGGCGCCGGGGCCGCCGAACTGACGTCGGCCAGCCTGTTGACACCCTTGGTGGGCAGCTCGACCGCAGCTGCGGCAATCCTGATATGGCGGGCGGTTACGTATTACTTTTATCTGCTGGCTGGGG < NC_002947/1557391‑1557245 TCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGC > 1:209786/1‑149TCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGC > 8:290011/1‑149 CCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCC > 7:76773/1‑149 CCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGGCCAATTCAGTCTGCTGCCTGGCGGCGCCG < 4:285450/149‑1 CCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGGCCAATTCAGTCTGCTGCCTGGCGGCGCCG < 6:352186/149‑1 CCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGGCCAATTCAGTCTGCTGCCTGGCGGCGCCGGG > 3:334409/1‑106 CCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCGGCCAATTCAGTCTGCTGCCTGGCGGCGCCGGG < 4:334409/106‑1 CGGCCAATTCAGTCTGCTGCCTGGCGGCGCCGGGGCCGCCGAACTGACGTCGGCCAGCCTGTTGACACCCTTGGTGGGCAGCTCGACCGCAGCTGCGGCAATCCTGATATGGCGGGCGGTTACGTATTACTTTTATCTGCTGGCTGGGG < 3:363852/149‑1 TCCCAGCAGGCACACAAACACCGGCCCCCCAGCCAGCAGATAAAAGTAATACGTAACCGCCCGCCATATCAGGATTGCCGCAGCTGCGGTCGAGCTGCCCACCAAGGGTGTCAACAGGCTGGCCGACGTCAGTTCGGCGGCCCCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1557219‑1557369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgGCCAATTCAGTCTGCTGCCTGGCGGCGCCGGGGCCGCCGAACTGACGTCGGCCAGCCTGTTGACACCCTTGGTGGGCAGCTCGACCGCAGCTGCGGCAATCCTGATATGGCGGGCGGTTACGTATTACTTTTATCTGCTGGCTGGGG < NC_002947/1557391‑1557245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |